Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00010 ATGATGGCGTTCTTCAGTGGAGCTCAGCGATTTCTTTGGCAGTCTTCTTCAGTTGTGGCCTCCCACTTCACCCCTACTCGTTTCACTTCGACTCTTACTTCCCCAAAACTCTTCATCAGCGGTCTTTCAAGACTGACAACAGATGAAAAACTTACTGAAGCGTTTTCTCCTTTCGGGCAGCTGCTTGAAGCAAAGGTTATAATGGATAGAGCCTCTGGACGGTCAAAGGGATACGGATTTGTAACTTATGCAACCGTAGAAGATGCTGAAAAGGCGAGAGCCGGAATGAATGCTAAATTTATTGATGGATGGGTTATATTTGTTGATCCTGCCAAACCAAGAGAGCCCAGACCTCCTCAGCAGCCACAGTCTCAGCCCTCTGGAGCTGGTTTCACGGTTAACAAGACAATTGGATGGTGTGGTTGA 426 0.4671 MMAFFSGAQRFLWQSSSVVASHFTPTRFTSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQLLEAKVIMDRASGRSKGYGFVTYATVEDAEKARAGMNAKFIDGWVIFVDPAKPREPRPPQQPQSQPSGAGFTVNKTIGWCG 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00010 141 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 113 IPR000504 GO:0003723
Arst6g00010 141 PANTHER NUCLEOLAR PROTEIN 8 21 140 - -
Arst6g00010 141 FunFam RNA binding protein 22 135 - -
Arst6g00010 141 SUPERFAMILY RNA-binding domain, RBD 34 135 IPR035979 GO:0003676
Arst6g00010 141 Gene3D - 26 135 IPR012677 -
Arst6g00010 141 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 103 IPR000504 GO:0003723
Arst6g00010 141 MobiDBLite consensus disorder prediction 112 133 - -
Arst6g00010 141 SMART rrm1_1 36 109 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00010 Arst-Chr6 122934 126083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00010 37 126 Eukaryotic Initiation Factors Gene Family AT3G16380 36.559 3.64e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00010 - - gmx:100306326 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00010 6 122934 126083 Arst6g00010 6 122934 126083 ECH