Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04636 ATGAACATGTCACTTCTTCTTCTTATTGTCACACTCTTGATGGCTACAGTTAAAGTTGCAGTTACATCTTCTTCTGATGCTGTTACGCTGCTTATGAGATTCAAGAACTCCCATGTCTCCTCTGATTCAAACAACTTCCTGGCTGACTGGTCCTCCTCCAAGCCCTGCACGTGGAGGGGCATCACGTGCTCCCCCCAAGGTCAAGTCACATCCATCAACCTCACCGGAGCAGGCCTCGCTGGCACCCTTGACCTCCCTACTCTCACGGCTTTGCCTTCTCTGCACCACCTTGTGTTGCGTGGCAACTACTTCTCCTTAGGGAATCTCTCTGTCTCTTCCTTCTGCGCTCTGCAGACGCTTGATCTTTCCTCCAACAACTTCTCTGGAAACTTTCCCTTCCACCAACTTCTTCCATGTCGAGCTCTCACCTATCTCAACTTGTCAAGGAATCTGATTACTGGCGCCACGGCCACCCCTTTTGGCTTCGCTGCTTCTCTGCTTCAGCTTGACTTGTCGAGGAACCAGGTTTCCCAGCCTGAGATTTTGACTTACACTCTCTCCAATTGTCAGGCTTTGACTCTGCTTAATTTGTCTGACAACCGAATCTCTGCTCAACTCAGTGAAACTAGTCTTGCTGCTTCTTGTGCCAACCTCACTACTCTCGACCTCTCCCATAATCAGCTCTCCGGGGAGTTGCCGCCGAGTTTCGTGGGGGATTCTTTGGAGCTTTTGGATCTCTCTGGCAACAACTTTTCAGGGATGTTCTCCAGGTTTGGGTTTGGGAGCTGCAGGAACCTTGTTAGGTTGAGTTTATCTCACAATGTGGTCTCTGGTGGAGAGTATCCAAGCAGCCTGAGGAATTGCCAGGCTCTGGAGACTCTGGATCTTTCTCACAATGACCTTGGACCAATCATTCCTGGGGCTCTTCTTGCAGGTCTCAAGAGCTTGAAGGAACTCTTTTTGGGGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCTTGTGATTCTCTTGTGGTTCTTGATCTCTCTGATAATAAGCTTTCGGGTGAGTTGCCTTTGACTTTTGGGGACTGTTCTTCTCTGCAGAGTCTTAACCTTGCTAAGAATTATCTCCATGGAGATTTCCTCACTTCAGTTGTAAGCAAACTTTCAAGTCTTAGGTACCTTTATGTGGCATTCAATAACATCACAGGGCCTGTTCCTCTCTCTCTTGCCAATTGCACACAGCTTCAGGTTCTTGACCTCAGTTCCAATGGCTTCACCGGCACCATCCCCTCTGGCTTTTGCTCTTCTTCCTCGCCTCTCCAAAAGATGCTTCTTGCTGACAATTACCTGGAAGGGAGGGTGCCTGCGGAGCTTGGTGGCTGCAAGAATTTGAGAACAATTGATTTCAGCTTCAACAATTTGAATGGCCCTATACCCTCTCGAGTTTGGTCCCTTCCCAATCTTTCAGACTTGATTATGTGGGCTAACAACCTTACAGGAGAGATTCATGAAGGCATATGCAGCAATGGAGGAAACCTTGAGACCTTAATTCTTAACAACAATTTCATATCAGGCTCCATTCCAAGCTCAATTGCCAATTGCACCAACATGGTTTGGGTCTCACTGGCAAGCAACCACATTACCGGGGAAATACCTGCCGGAATTGGGAATCTAAAGAAACTTGCCATCCTCCAATTAGGCAACAATTCACTTGCCGGAGGGATCCCACCAGAGCTTGGGAAATGTGAAAGCCTCATATGGTTAGATTTGAATAGTAACAACCTCACCGGTACTATCCCCTCTGATCTTGCCAATCAAGCTGGCTTGGTTATGCCAGGAACTGTTTCTGGGAAGCAGTTTGCATTTGTGAGAAATGAAGGTGGGACAAGCTGCAGGGGAGCCGGAGGTTTGGTCGAATTCGAAGATATCAAGGCTGCAAGGCTTGAGAGTTTTCCTATGGTGCATTCCTGTCCATTAACTCGAATATACTCGGGCGTCACGGTTTATACATTTTCCAAGAATGGCAGCATGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAGGTCCTGAATCTGGGACACAATAAGCTGATTGGGAACATTCCAGAGAGCTTTGGTGGTCTAAAAGCAATAGGAGTGCTTGATCTCTCCCACAATAACCTTCAAGGACTCATCCCTGCTTCATTAGGAGCTCTATCTTTTCTGAGTGACCTTGATGTCTCCAATAATAACCTCACAGGCACCATTCCCACCGGTGGTCAGCTAACAACTTTCCCTTCATCTAGATACGAAAACAACTCTAATCTTTGTGGTGTTCCTTTGCCCCCTTGCCACGGCGCTTTGAATCGGAATCATGCAGCAGGTTTCCATGCTTGGAAGAAGAAGCAACCTATTGTGACCGGGATTGTGATTGGCCTTGTTTTCTTTGTCTTGTTTTTTGTTGCCTTTGTTCTTGCTTTGTATCAAGTGAAGAAGTACCATTGGAAGGAGGAACAGAGAGAAAAGTACATAGAAAGTCTTCCAACTTCAGGTAGCAGCAGTTGGAAACTATCAAGCATTCCTGAGCCTCTCAGCATCAATGTTGCCACCTTTGAGAAACCACTGCGAAAGTTGACATTCGCGCATCTTCTCGAGGCTACTAACGGTTTCAGTGCCGAAACCTTGATAGGGTCTGGTGGTTTTGGTGAAGTCTACAAGGCTAAGCTGAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTTATTCATGTAACAGGCCAGGGAGACAGAGAGTTCATGGCTGAAATGGAAACCATTGGAAAGATTAAGCACAGAAACCTTGTTCCATTGCTCGGTTACTGTAAAATTGGAGAGGAGAGGCTTCTTGTGTATGAGTACATGAAATGGGGAAGTCTAGAGGCTGTTCTTCATGATCGTGCCAGATCGAAGCTTGATTGGGGAGCAAGAAAGAAGATTGCCATAGGGTCAGCAAGAGGACTTGCATTTCTACACCATAGTTGTATTCCTCACATTATACACCGCGACATGAAGTCCAGCAACATTCTTCTTGATGAAAATTTTGAGGCTAGAGTTTCAGATTTTGGCATGGCAAGATTGGTTAATGCCCTGGACACTCATCTCAGTGTGAGCACACTTGCTGGAACACCAGGTTATGTACCTCCTGAGTACTATCAGAGTTTTAGGTGCACAACAAAGGGTGATGTCTATAGTTATGGTGTCATACTTCTAGAGCTTTTATCCGGGAAGAGGCCGATTGACTCGTCGGAGTTTGGCGATGACAACAATCTGGTTGGATGGTGTAAGCAACTTCACAAAGAGAAAAGAAGTAGTGAAATTCTAGATCCTCACTTAATCAAGCAAGCATCTAGTGAAGGTGAACTCTACCAGTGTTTGAGAATTGCCTTTGAGTGTTTAGATGAGAGACCGTATCGGAGACCAACTATGATTCAAGTCATGGCAATGTTTAAGGAGATTCAAGCTGATACAGATAATGATGTCCTTGATGCCTTCTCTATGAAATGCAATGTCATTAAGGAAGCATAA 3576 0.4463 MNMSLLLLIVTLLMATVKVAVTSSSDAVTLLMRFKNSHVSSDSNNFLADWSSSKPCTWRGITCSPQGQVTSINLTGAGLAGTLDLPTLTALPSLHHLVLRGNYFSLGNLSVSSFCALQTLDLSSNNFSGNFPFHQLLPCRALTYLNLSRNLITGATATPFGFAASLLQLDLSRNQVSQPEILTYTLSNCQALTLLNLSDNRISAQLSETSLAASCANLTTLDLSHNQLSGELPPSFVGDSLELLDLSGNNFSGMFSRFGFGSCRNLVRLSLSHNVVSGGEYPSSLRNCQALETLDLSHNDLGPIIPGALLAGLKSLKELFLGRXXXXXXXXXXXXXXXXACDSLVVLDLSDNKLSGELPLTFGDCSSLQSLNLAKNYLHGDFLTSVVSKLSSLRYLYVAFNNITGPVPLSLANCTQLQVLDLSSNGFTGTIPSGFCSSSSPLQKMLLADNYLEGRVPAELGGCKNLRTIDFSFNNLNGPIPSRVWSLPNLSDLIMWANNLTGEIHEGICSNGGNLETLILNNNFISGSIPSSIANCTNMVWVSLASNHITGEIPAGIGNLKKLAILQLGNNSLAGGIPPELGKCESLIWLDLNSNNLTGTIPSDLANQAGLVMPGTVSGKQFAFVRNEGGTSCRGAGGLVEFEDIKAARLESFPMVHSCPLTRIYSGVTVYTFSKNGSMIXXXXXXXXXXXXXXXXXXXXQVLNLGHNKLIGNIPESFGGLKAIGVLDLSHNNLQGLIPASLGALSFLSDLDVSNNNLTGTIPTGGQLTTFPSSRYENNSNLCGVPLPPCHGALNRNHAAGFHAWKKKQPIVTGIVIGLVFFVLFFVAFVLALYQVKKYHWKEEQREKYIESLPTSGSSSWKLSSIPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKWGSLEAVLHDRARSKLDWGARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWCKQLHKEKRSSEILDPHLIKQASSEGELYQCLRIAFECLDERPYRRPTMIQVMAMFKEIQADTDNDVLDAFSMKCNVIKEA 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04636 1192 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 478 1172 - -
Arst5g04636 1192 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Arst5g04636 1192 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 509 601 - -
Arst5g04636 1192 Gene3D Transferase(Phosphotransferase) domain 1 972 1188 - -
Arst5g04636 1192 Gene3D Ribonuclease Inhibitor 161 790 IPR032675 -
Arst5g04636 1192 Pfam Leucine Rich Repeat 514 536 IPR001611 GO:0005515
Arst5g04636 1192 SMART serkin_6 896 1167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04636 1192 Pfam Protein kinase domain 898 1165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04636 1192 SUPERFAMILY Protein kinase-like (PK-like) 877 1167 IPR011009 -
Arst5g04636 1192 ProSiteProfiles Leucine-rich repeat profile. 290 311 IPR001611 GO:0005515
Arst5g04636 1192 Gene3D Phosphorylase Kinase; domain 1 859 971 - -
Arst5g04636 1192 SUPERFAMILY L domain-like 380 790 - -
Arst5g04636 1192 FunFam Brassinosteroid LRR receptor kinase 972 1172 - -
Arst5g04636 1192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1016 1028 IPR008271 GO:0004672|GO:0006468
Arst5g04636 1192 PRINTS Leucine-rich repeat signature 218 231 - -
Arst5g04636 1192 PRINTS Leucine-rich repeat signature 721 734 - -
Arst5g04636 1192 ProSiteProfiles Protein kinase domain profile. 896 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04636 1192 Coils Coil 680 680 - -
Arst5g04636 1192 Gene3D - 617 674 - -
Arst5g04636 1192 SUPERFAMILY RNI-like 71 404 - -
Arst5g04636 1192 Pfam Brassinosteroid receptor island domain 610 674 IPR045381 -
Arst5g04636 1192 FunFam serine/threonine-protein kinase BRI1-like 2 857 971 - -
Arst5g04636 1192 Gene3D Ribonuclease Inhibitor 19 130 IPR032675 -
Arst5g04636 1192 Pfam Leucine Rich repeat 214 231 IPR001611 GO:0005515
Arst5g04636 1192 Pfam Leucine Rich repeat 288 302 IPR001611 GO:0005515
Arst5g04636 1192 SMART LRR_typ_2 215 238 IPR003591 -
Arst5g04636 1192 SMART LRR_typ_2 745 768 IPR003591 -
Arst5g04636 1192 SMART LRR_typ_2 487 511 IPR003591 -
Arst5g04636 1192 SMART LRR_typ_2 288 312 IPR003591 -
Arst5g04636 1192 SMART LRR_typ_2 414 438 IPR003591 -
Arst5g04636 1192 SMART LRR_typ_2 721 744 IPR003591 -
Arst5g04636 1192 SMART LRR_typ_2 560 584 IPR003591 -
Arst5g04636 1192 SMART LRR_typ_2 390 413 IPR003591 -
Arst5g04636 1192 ProSitePatterns Protein kinases ATP-binding region signature. 902 925 IPR017441 GO:0005524
Arst5g04636 1192 Pfam Leucine rich repeat 141 202 IPR001611 GO:0005515
Arst5g04636 1192 Pfam Leucine rich repeat 701 758 IPR001611 GO:0005515
Arst5g04636 1192 Pfam Leucine rich repeat 343 403 IPR001611 GO:0005515
Arst5g04636 1192 Coils Coil 701 701 - -
Arst5g04636 1192 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 335 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04636 Arst-Chr5 107058276 107062216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04636 5 1185 Receptor kinase-like Gene Family AT1G55610 61.545 0.0 1442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Arst5g04636 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04636 - - gmx:100779072 1580.07