Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst5g04618 | ATGGCAAAGGGTTTGCATCTTTCACTCTCCCTTGTTCTTGTCTCTGTCATTGCAGTCACATTCAGAGCCGAGAATGTGAGCGGAAGCCCTTCGAATTTCATAAAATCGTCTTGCAGCACGACGACGTTTCCAAACGTGTGCGTGGAGTCTCTGTCGGTGTATGCAAACACGATCCAGCAAGACCCTCACGAGCTGGTCCAAACTGCCCTCACACTCAGCCTGAACAGGAGCCAGTCCACAAGGGCATTTGTGACAAAGTGCAACAAGTTCAGAGGGCTCAAACCCAGAGAGTACGCGGCCCTGAAGGACTGCGCAGAGGAGATCAGCGACAGCTGTGACAGGCTGAGCAAGTCGCTGAAGGAGCTGAAGCTGTGCAAGGTGAAGGGTGACGATTTCAGATGGCACATCAGCAATGTTGAGACCTGGGTCTCTTCTGCTTTGACTGATGACAGCACCTGCGGTGATGGCTTTGCTGGTAACGCTCTCAATGGTAAGATGAAGGATTCCATCAGGGCTAGAATGGTAAATCTTGCTCAGGTCACTAGCAATGCCTTGTCACTCATCACCCACTATGCTTCTCAATATTAG | 588 | 0.5085 | MAKGLHLSLSLVLVSVIAVTFRAENVSGSPSNFIKSSCSTTTFPNVCVESLSVYANTIQQDPHELVQTALTLSLNRSQSTRAFVTKCNKFRGLKPREYAALKDCAEEISDSCDRLSKSLKELKLCKVKGDDFRWHISNVETWVSSALTDDSTCGDGFAGNALNGKMKDSIRARMVNLAQVTSNALSLITHYASQY | 195 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst5g04618 | 195 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 29 | 191 | IPR035513 | - | |
| Arst5g04618 | 195 | NCBIfam | pectinesterase inhibitor domain | 6 | 191 | IPR006501 | GO:0004857 | |
| Arst5g04618 | 195 | Pfam | Plant invertase/pectin methylesterase inhibitor | 32 | 187 | IPR006501 | GO:0004857 | |
| Arst5g04618 | 195 | FunFam | Pectin methylesterase inhibitor 1 | 29 | 191 | - | - | |
| Arst5g04618 | 195 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 10 | 187 | - | - | |
| Arst5g04618 | 195 | SMART | PMEI_2 | 29 | 187 | IPR006501 | GO:0004857 | |
| Arst5g04618 | 195 | CDD | PMEI-like_3 | 36 | 193 | - | - | |
| Arst5g04618 | 195 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 31 | 191 | IPR035513 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst5g04618 | Arst-Chr5 | 107008679 | 107009476 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst5g04618 | 29 | 188 | Carbohydrate Esterase | AT3G14310 | 28.834 | 1.30e-19 | 84.0 |