Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04617 ATGGGAAGAACAATGGTCATCATCAGGCTGTTATTGCTGGTATCTTCACTTGTCTTATCAGCATCAAGAAGAATACCTTCTTCTTCTCATTCTTCTGGTAACATTGATTGGTGGTGCAACCTAACGCCACACCCTGGAACATGCAAGTATTACTTAGGTAAAAGCAACCAACAGCACACAACAATAATCAAGCACAAAACCGAGTTGAGGAGCATGCTTGTGAAATCTGCATTAGAGGAAGCAACCATCATGCAAAAGGAAGCACACGGTTTGGACCAAAACTTGATCAAGACAAAGAACCATGAAGCTGTGCATGGCGATTGCTTGAAGCTCTACGACGACACCATCTTCCATCTCAAGCGTACCCTCGAATGCCTTAACAACAACAACTGTTTAGCGGTTGATGCACAGACATGGCTCAGCACTGCTCTCACAAACATCCAAACGTGTCAAACGGGTGCACAAGAACTCAGCGTTCAAGATTTCAAGGTTCCATCTAAGAACACCAACGTCACTGAGATGGTGAGGAACAGCTTAGCCATCAACTTGGATTTTGTCAAGATGATGAAGCAACAACCACAAGCAAATCGCACATTAGCAGAAGCAGAAGTAGAGGGAGAAGAAGAAGAAGCAGAAGACGATTTTCCGAGCTGGTTTTCCGGTCACGAAAGGAGGCTTCTTCAATCTAGCGCGATAAAGGCTCACGTTGTGGTGGCGAAAGACGGATCGGGGAATTTCAAGACGGTGCAAGAAGCGCTGAACGCGGCGGCGAAGAGAACCGTGAAAACAAGCAGATTTGTAATACACGTGACAAAAGGAGTATACAAAGAAAACATAGAGGTGGAGAAAAACAACGATAACGTGATGCTGGTTGGTGACGGCATGAGAAACACCATCATTAGCGGCAGCAGAAGTTCTCAAGACGGTTACACAACATACAGCTCCGCAACCGCCGGCATAGATGGGCTTCACTTCATCGCAAGAGACATCACTTTCCAAAACACCGCGGGCCCACGCAAGGGCCAAGCTGTGGCCCTGAGATCCGCCTCCGACCTCTCTGTGTTCTACAAGTGCGGCATTGTGGGCTACCAAGACACGCTCATGGCCCACGCCCAGCGCCAGTTCTACAGACAGTGCTACATCTACGGCACCGTTGACTTCATCTTCGGCAACGCCGCCGTGGTCTTTCAAAACTGTCACATATTTGCAAGAAAGCCCCTGGATGGGCAGGCCAACACTATCACCGCACAGGGCCGAGGGGATCCCTTCCAGAACACCGGCATCTCCATCCACAAATCCGTTATCAAAGCCGCACCCGATCTCGTTCCTGTTTTGGACAAGGTTCAGACCTTCTTGGGCCGGCCCTGGCAGCAGAACGCTAGGGTTGTTGTTATGAGGACTTACTTGGACTCTCTAATAAGCCCATTGGGCTGGGATGAATGGAATGGATCTGACTTTGCCAAGGATACTTTATATTTTGGAGAGTATGAGAATTCTGGGCCTGCTTCCGATACAAGCAAAAGAGTGAAGTGGCCCGGTTTTCATGTGATATCAAACCCAAAAGAGGCTTCACAATTCACTGTGACTTCTCTTCTTGCTGGTCGCACCTGGTTGCCTACCACATCTGTTCCCTTCAGCTCTGGCCTCTGA 1650 0.4867 MGRTMVIIRLLLLVSSLVLSASRRIPSSSHSSGNIDWWCNLTPHPGTCKYYLGKSNQQHTTIIKHKTELRSMLVKSALEEATIMQKEAHGLDQNLIKTKNHEAVHGDCLKLYDDTIFHLKRTLECLNNNNCLAVDAQTWLSTALTNIQTCQTGAQELSVQDFKVPSKNTNVTEMVRNSLAINLDFVKMMKQQPQANRTLAEAEVEGEEEEAEDDFPSWFSGHERRLLQSSAIKAHVVVAKDGSGNFKTVQEALNAAAKRTVKTSRFVIHVTKGVYKENIEVEKNNDNVMLVGDGMRNTIISGSRSSQDGYTTYSSATAGIDGLHFIARDITFQNTAGPRKGQAVALRSASDLSVFYKCGIVGYQDTLMAHAQRQFYRQCYIYGTVDFIFGNAAVVFQNCHIFARKPLDGQANTITAQGRGDPFQNTGISIHKSVIKAAPDLVPVLDKVQTFLGRPWQQNARVVVMRTYLDSLISPLGWDEWNGSDFAKDTLYFGEYENSGPASDTSKRVKWPGFHVISNPKEASQFTVTSLLAGRTWLPTTSVPFSSGL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04617 549 ProSitePatterns Pectinesterase signature 2. 381 390 IPR033131 -
Arst5g04617 549 NCBIfam pectinesterase inhibitor domain 8 182 IPR006501 GO:0004857
Arst5g04617 549 CDD PMEI-like_3 37 182 - -
Arst5g04617 549 Pfam Pectinesterase 235 534 IPR000070 GO:0030599|GO:0042545
Arst5g04617 549 FunFam Pectinesterase 229 549 - -
Arst5g04617 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 182 IPR035513 -
Arst5g04617 549 SUPERFAMILY Pectin lyase-like 230 548 IPR011050 -
Arst5g04617 549 Gene3D - 229 549 IPR012334 -
Arst5g04617 549 PANTHER PECTINESTERASE 15 540 - -
Arst5g04617 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 184 IPR035513 -
Arst5g04617 549 Pfam Plant invertase/pectin methylesterase inhibitor 35 181 IPR006501 GO:0004857
Arst5g04617 549 SMART PMEI_2 30 181 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04617 Arst-Chr5 106999581 107001465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04617 38 549 Carbohydrate Esterase AT5G51490 54.511 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04617 K01051 - gmx:100806133 766.533