Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04611 ATGGAAGACTACTCAGAGGAAGATTATGAGTTCCTCAACCTTAGCCTTTCAGTTACTACTCCTTCTTCTAGGGAAGCCAAAATCATGAAGAAAAAGAAGAAGAACTATGAAGCCAAGATCTTGAGGCTCCTCCAACTCAGGGAAAACATGCTAAGACAAGATCACCATAACCACCATCACCACCTCCAAAGAAGAAAAGCAGGCACCAACAACAACAACAACAATCTCATCCACTTGCTCCTCACAACGGCCACCGCCATTGATGAAGACAGCAACAACATTGCTGCATCTCTTGACAATCTCACAGATCTGTACCAAACAGTTTCCCTAACAGGTGATTCAGTTGAGCGTGTTGTGGCGTACTTCGCCGATGGCCTCGCCGCGAGGCTCCTCACAAAGAAATCTCCATTCTATGACATGCTCATGGAGGAGCCAACATGTGAAGAAGAGTTTCTTGCATTCACAGATCTCTATAGAGTCTCACCTTACTACCAATTCGCTCATTTCACTGCAAACCAAGCAATCTTAGAAGCCTTTGAGGAAGAAGAAGACAGGAACAACCGTTCAATCCATGTCATTGACTTTGACGTCTCCTACGGATTCCAATGGCCTTCTCTAATCCAATCACTCTCAGAGAAAGCTTCAAGCGGAAACCGCATCTCTCTAAGGATCACCGGATTCGGCACCACTCTGAAGGAGCTTCAAGAAACGGAATCCAGATTGGTGAGCTTCTCCAAAGGCTTCGGTAACCTTGTGTTTGAGTTTCAAGGGTTGTTGAGAGGGTCCAGGATCACGAATCTGAGGAAGAAGAAGAACGAGAGTGTTGCAGTGAACCTTGTTTCATACCTCAACAGTGCGAGCAACAGCAGTTTGTTGATGAATTTCTCTGACACATTGGGATTCGTTCGGTCTCTCAGGCCTTCGGTTGTGGTGTTGGTGAAGCAAGAAGGTAGCAGGAGCATTAGAACGTTCTTGTCTCGGTTCACAGAGTCATTGCATTACTTTGCCGCCATGTTTGATTCCCTTGATGATTGTCTTCCACTGGAGAGCGCAGAGAGGTTGAGGATTGAGAAGAAGCTTCTCGGGAAAGAGATCAAGAGCATGCTCAACTGTGACATGGAGATGGACGGCGTGGATTGTCCCAAGTATGAGAGGATGGAAGCGTGGAAAGCCAGAATGGAGAATCATGGTTTTGTTGCCATGAAGATGAGCTCCAAATCTCTCATGCAAGCTAAGCTTCTTCTCAAGATGAGGACTCATTATTACTATTCTCCACCACTTCAATTTGATGATGATGCCGCCGGCGGCGGTGGTGGTTTCAGGATTTCTGAAAGGGACCAGGGTAGAGCCATTTCTTTGGGGTGGCAGAATAGGTTTCTTCTCACTGTGTCCGCATGGCAATTACCACTTTCATCATCATAA 1422 0.4627 MEDYSEEDYEFLNLSLSVTTPSSREAKIMKKKKKNYEAKILRLLQLRENMLRQDHHNHHHHLQRRKAGTNNNNNNLIHLLLTTATAIDEDSNNIAASLDNLTDLYQTVSLTGDSVERVVAYFADGLAARLLTKKSPFYDMLMEEPTCEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEEEEDRNNRSIHVIDFDVSYGFQWPSLIQSLSEKASSGNRISLRITGFGTTLKELQETESRLVSFSKGFGNLVFEFQGLLRGSRITNLRKKKNESVAVNLVSYLNSASNSSLLMNFSDTLGFVRSLRPSVVVLVKQEGSRSIRTFLSRFTESLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKSMLNCDMEMDGVDCPKYERMEAWKARMENHGFVAMKMSSKSLMQAKLLLKMRTHYYYSPPLQFDDDAAGGGGGFRISERDQGRAISLGWQNRFLLTVSAWQLPLSSS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04611 473 ProSiteProfiles GRAS family profile. 67 467 IPR005202 -
Arst5g04611 473 Coils Coil 26 53 - -
Arst5g04611 473 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 66 462 IPR005202 -
Arst5g04611 473 Pfam GRAS domain family 76 467 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04611 Arst-Chr5 106945062 106946619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04611 79 467 GRAS Transcription Factor Family AT2G04890 32.323 4.69e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst5g04611 GRAS 2.8e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04611 - - gmx:100813979 635.95