Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04606 ATGGCCAGGTATGAGTACATGTACACCTCTTTCCTTTGTGTTTTTCTTCTCTATTGCTGCTACTGCCCCATCATGGTGATGTCTCAGCTATCTCAAAACCAAACTAGCACCATGGCCAATCTCTCCAAGCTACTTGGTACCTCTGCTCCATGGAATAGTGGCAATCATTCAAATCCATGTTCATGGAATGGAGTCACTTGTGACTCTACCAAATCCCATGTCATCATGATTTCTCTATCTGGGAACTCTCTCTCTTCCAGTGACTTCCTTCCTGTTCTTTGCCAACTTGAAACCCTGCAGCATCTTGATGTATCCAACAACAGTCTCGCCTCAATCCCTGATGAGTTCATTACTGAATGCGGAAAGATGAAGTACTTAAAGCTGCTGAATTTCAGTAGAAACCTCTTATCAGGTTCTTTACCTACTTTCCTTGGTTTTGATGCACTTGAATACCTGGACATGTCTTTCAATGTATTGGGAAGTAGTATTGATATTCAGTTAGATGAAATGATTAGGCTCAAGAGTTTGAACCTTACTCACAACAACTTCAATGGTACTCTTCCCACCAAATTGGGCAAGTCCATGGTTCTGGAGCAACTTGTGCTCTCTAACAACCAATTTCAAGGAGAAATCCCTGAAGAACTGTTTAGTTATGAAAACTTGACTTCGATTGATCTCGGGGGAAATACCCTTTCAGGTGCAATTCCTACCCATATTGTACAGCTATCTAAGTTGCAAACTTTGATTCTTTCCTCTAATCACCTCAGTGGTCCAATTCCAATCTCAATCCTGAACATCACAACCCTTGTAAGATTTGCTGCAAACCTGAACCGTTTCAGTGGTTCTTTACCTTCTGACATTTCAAATAATCTTATCAGTTTGGATCTTAGTGGCAATAATTTGTCTGGTCCCATTCCAAAAAACATTTTATCTTCACCAAAAATGGAGGTTGTGGATTTGTCCAATAATACTTTGAGTGGAACATTGTTACTCACAAGTATTTCTCCTAGCATGATCAGGTTGAGATTAGGGAACAATTTGCTGAAGGGAGACATTCCCTCAGATGCTTTTGCAAAAGCTCAGAATTTGACATACTTGGAGCTGGAAAGTAATGCACTGACAGGAGCAATTCCAGCTATATTGGGTTCTTGCCTCAACCTGGCATTGCTGGATTTGTCTCAGAATCATTTGAGTGGGACATTGCCACCAGAGCTTGGAAATCTTCGCAATCTTCAAGTCTTAAAACTTCAAATGAACAAGTTTAATGGCACAATCACAACTCCATTTCAAATTGGCCAACTACAAAAGTTGTTAACACTGAATTTGAGCCAGAACTCTTTGACCGGATCGATTCCATCCCAGATATCAAGCTTGAGCAACCTTAAGTTCCTGAACTTGCAAATGAACAACCTGAGTGGTTCCATACCTCCATCCATTGGCATCTCAAAAAGCCTTCTGGATCTTCAACTAGGTGGAAACCAACTAAGTGGTGCTATCCCAAGTATGCCAATATCTCTACAGGTTGCCGTGAATCTTAGTCACAACAACTTTAGTGGATCCATTCCCAGCAGTTTGAGTAGTTTGGATAACCTGGAAATATTGGATCTCTCGTATAACAAATTCTCTGGTGGAGTTCCTGGTGATCTAGCCGGAATGTCATCTTTGACAGAGTTGTTACTTACTAACAACAATCAGCTTTCTGGTGTTCTTCCAAAATTTACCCATTTTGTTCAAGTTGAATACAATGGAACCAGTTTAGTACTGGCTCCTACATCGGACAACCCAACACCAAGCTATTACCCGGGATCTAGAAAGAAGGGATCATCTGTTGTTGTGGCAATCCTTGTTGCAATTGCAGCAGCCGTGTTTCTTGTTGGCCTTGTCACTCTGCTGCTTGTACTTGTGTCACGACACTATTCGAAGGTTAACGATGAGAATATACATTCAGGCGAAGATCATCGCCTTCCTCAGGTTGTCCAAAGTCATTTGTTAACTCTTAATGGTCTCCACAGATCAAACATTGACTTCTCCAAGGCCATGGAAGCAGTTGCTGAAACATCCAATGTTACTTTGAAGACCAGGTTTTCAACTTATTACAAGGCCATCATGCCATCTGGATCAATCTATTTTGTCAAGAAGATGAATTCAACTGAAAGGGCATTGCCAGCGAGCAGCCATGTTAGAATTGGGAAAGAGATGGAGGCCTTGGCGAAATTGAACAATTCAAATGTCATGACTCCTTTAGCCTATGTTTTGTCCAGTGATGCAGCTTACACATTATATGAGTTTGTCTCAAATGGTTCCCTCTTTGATGTTCTTCATCATGGAAGCATGGGAAACTCTTTGGATTGGGCTAGCAGATATAGTATATCAGTTGGTGTGGCTCAAGGTCTCTCTTTTCTTCATGGCATCACCTCAAGTCCATTACTACTTCTTGATCTGTCAAGTAAAAGTATTATGCTCAAGTCCCTCAAGGAGCCTCTGGTTGGAGATATTGAACACTACAAGGTCATTGATCCTTCCAAAAGTACAGGAAATTTTTCTGCTCTTGCTGGTTCTGTTGGCTATGTTCCTCCAGAGTATGCATACACAATGACAGTAACAGTGGCTGGGAATGTATATAGCTTTGGGGTCATCCTGCTTGAACTGCTGACTGGAAAGCCTGCAGTGACAGAGGGAACCGAATTGGTGAAGTGGGTTTTGCATAATTCGATGAACAAAGATTACATTCTTGATTCCAATGTTAGCAAAACATCTCAAGCGGTGAGAAACCAGATGCTAGCAATTCTGCAGATTGCTCTTGTTTGTGTTAGTACATCCCCAGAAACAAGACCAAAGATGAAGAGTGTGCTAAGAATGCTTCTTAATGCTAGATAG 2877 0.4136 MARYEYMYTSFLCVFLLYCCYCPIMVMSQLSQNQTSTMANLSKLLGTSAPWNSGNHSNPCSWNGVTCDSTKSHVIMISLSGNSLSSSDFLPVLCQLETLQHLDVSNNSLASIPDEFITECGKMKYLKLLNFSRNLLSGSLPTFLGFDALEYLDMSFNVLGSSIDIQLDEMIRLKSLNLTHNNFNGTLPTKLGKSMVLEQLVLSNNQFQGEIPEELFSYENLTSIDLGGNTLSGAIPTHIVQLSKLQTLILSSNHLSGPIPISILNITTLVRFAANLNRFSGSLPSDISNNLISLDLSGNNLSGPIPKNILSSPKMEVVDLSNNTLSGTLLLTSISPSMIRLRLGNNLLKGDIPSDAFAKAQNLTYLELESNALTGAIPAILGSCLNLALLDLSQNHLSGTLPPELGNLRNLQVLKLQMNKFNGTITTPFQIGQLQKLLTLNLSQNSLTGSIPSQISSLSNLKFLNLQMNNLSGSIPPSIGISKSLLDLQLGGNQLSGAIPSMPISLQVAVNLSHNNFSGSIPSSLSSLDNLEILDLSYNKFSGGVPGDLAGMSSLTELLLTNNNQLSGVLPKFTHFVQVEYNGTSLVLAPTSDNPTPSYYPGSRKKGSSVVVAILVAIAAAVFLVGLVTLLLVLVSRHYSKVNDENIHSGEDHRLPQVVQSHLLTLNGLHRSNIDFSKAMEAVAETSNVTLKTRFSTYYKAIMPSGSIYFVKKMNSTERALPASSHVRIGKEMEALAKLNNSNVMTPLAYVLSSDAAYTLYEFVSNGSLFDVLHHGSMGNSLDWASRYSISVGVAQGLSFLHGITSSPLLLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGNFSALAGSVGYVPPEYAYTMTVTVAGNVYSFGVILLELLTGKPAVTEGTELVKWVLHNSMNKDYILDSNVSKTSQAVRNQMLAILQIALVCVSTSPETRPKMKSVLRMLLNAR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04606 958 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 652 763 - -
Arst5g04606 958 SUPERFAMILY RNI-like 259 569 - -
Arst5g04606 958 Gene3D Ribonuclease Inhibitor 29 145 IPR032675 -
Arst5g04606 958 ProSiteProfiles Protein kinase domain profile. 684 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04606 958 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 32 190 - -
Arst5g04606 958 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 764 958 - -
Arst5g04606 958 Gene3D Transferase(Phosphotransferase) domain 1 764 957 - -
Arst5g04606 958 SUPERFAMILY L domain-like 40 349 - -
Arst5g04606 958 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 236 329 - -
Arst5g04606 958 PRINTS Leucine-rich repeat signature 528 541 - -
Arst5g04606 958 PRINTS Leucine-rich repeat signature 387 400 - -
Arst5g04606 958 Gene3D Phosphorylase Kinase; domain 1 657 763 - -
Arst5g04606 958 SUPERFAMILY Protein kinase-like (PK-like) 695 954 IPR011009 -
Arst5g04606 958 SMART LRR_typ_2 552 575 IPR003591 -
Arst5g04606 958 SMART LRR_typ_2 458 482 IPR003591 -
Arst5g04606 958 SMART LRR_typ_2 96 119 IPR003591 -
Arst5g04606 958 SMART LRR_typ_2 528 551 IPR003591 -
Arst5g04606 958 SMART LRR_typ_2 434 457 IPR003591 -
Arst5g04606 958 SMART LRR_typ_2 170 194 IPR003591 -
Arst5g04606 958 SMART LRR_typ_2 242 266 IPR003591 -
Arst5g04606 958 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 331 586 - -
Arst5g04606 958 Gene3D Ribonuclease Inhibitor 146 237 IPR032675 -
Arst5g04606 958 Gene3D Ribonuclease Inhibitor 238 334 IPR032675 -
Arst5g04606 958 Gene3D Ribonuclease Inhibitor 335 594 IPR032675 -
Arst5g04606 958 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 219 954 - -
Arst5g04606 958 Pfam Leucine rich repeat N-terminal domain 46 68 IPR013210 -
Arst5g04606 958 Pfam Protein kinase domain 695 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04606 958 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Arst5g04606 958 Pfam Leucine rich repeat 510 564 IPR001611 GO:0005515
Arst5g04606 958 Pfam Leucine rich repeat 197 255 IPR001611 GO:0005515
Arst5g04606 958 Pfam Leucine rich repeat 98 159 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04606 Arst-Chr5 106931395 106935078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04606 149 958 Receptor kinase-like Gene Family AT2G41820 37.440 1.70e-145 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst5g04606 Pkinase 4.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04606 - - adu:107491546 1733.77