Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04592 ATGTTTGGGGAGTCATCAGGAAGGTGGTTGGATTCTGAATTATGGCATGCTTGTGCTGGTTCCATGGTTCAAATGCCACCTCTGAACTCAAAAGTTTTGTACTTTCCACAAGGGCATGCAGAGCATGCTCATGGAGGAAAAGTGGATTTCACAACAAGAATCCCTTCTTTCATTCCATGCTGGCTTTCTGGACTCAAATACATGGCAGATTCTGATACTGATGAGGTCTTTGTTAAGTTGTCTTTGACCCCTCTCACTCAAGAAAACACCAATGCATTGTTAATGGATTTGGAAGATGGTGGTGATGATTGTGGTAACAACAATGGAGGAGTTGTTGAGGGGGGTCATCAAGAGAAACCTGCTTCATTTGCAAAGACATTGACACAATCTGATGCCAACAATGGTGGAGGGTTCTCAGTGCCTCGTTACTGTGCTGAAACCATATTCCCAAGGCTGGATTATTCTGCTGATCCTCCTGTTCAGAACATTGTTGCCAAAGATGTTCATGGAAATTGCTGGAAGTTTAGGCACATCTATAGAGGGACTCCTCGCAGGCACCTATTGACCACTGGATGGAGCAATTTTGTGAGCCAGAAGAAGCTTGTAGCTGGTGATTCCATTGTGTTCTTGAGAGCTAAGGATGGTGATCTGTGTGTTGGGATAAGGAGGGCCAAGAAGGTGGCAGTTGGAGACGGCGAGGTGTCGGTGTCATCGGTGGTTGAAGCTGTGAGTTGTGGTGTTAATGGAAGGCCATTTGAGGTTGTGTACTATCCAAGGGGAAGCTCACCTGAGTTTTGTGTTAAGGCCTCAGTTGTGAGAGATGCAATGAAAGTGAGGTGGTGTTCTGGGATGAGGTTCAAGATGCCCTTTGAGACTGAGGATTCTTCTAGAATCAGTTGGTTCATGGGAACCATTTCTTCTGTTCAGCTTCTTGATCCCATTCATTGGCCTAATTCTCCATGGCGTCTTCTGCAGGTGGTGTGGGATGAACCAGAATTACTACAGCATGTGAAGTGTGTAAATCCTTGGTTGGTTGAATTAGTCTCAGACATTCCCACCTACCATCTTTCTCCATTCTCTCCAACAAGAAAGAAACCAAGGTTTCTTCACAACCAAGATTTTCACCTCATCAATAACCAACTTCCAATAATGCCAGGATTTCCCAGCAATTATAGTTACAGTAATGATAATCATCTTGTTATGAATCATTCTTCTAAGTCCTTAATGATGAACATTCAAGAGAATAACAGTATTGCAGGCATACAGGGAGCCAGGCATGCTCAACTTCTTGATCTGTCTCCATCTGATTATCCTTTCTTCAACAAGCTTCCATCACAATCACAATCACAATCACAATCACAATCACACAATATGCATCTTATTAGTCCCCCTTATTGTGGGACCTATAAGAACAACAATGCTGATATATCTTGCTTGTTAAGTGTTGGAAATTCTAGCCATAATTTAAAAGAAGAACACAATGAAGAAGTGAAATCATCATCACCACCATCCCATATCTTCTTGTTTGGACAACTGATTCACACTGAACAGCAATGTTCAAACGGTGGCAGTTCTAGCTCAAATGGGAACAATTCATCTGATGAAGGGACTTTGCTGAAGATGAAATCAAATAATGCTTCTGAATTGCATCTAAATAGTAGTCCAGTAGAGAAGAACCCTTCTTCTAATGGAGGGTCTCCCTGGTACAAAGATCAGCACAAATCTGGTCTTGGAACAGAAAATGTTAATCTACTTTGCTTGGCTCTATAG 1770 0.4237 MFGESSGRWLDSELWHACAGSMVQMPPLNSKVLYFPQGHAEHAHGGKVDFTTRIPSFIPCWLSGLKYMADSDTDEVFVKLSLTPLTQENTNALLMDLEDGGDDCGNNNGGVVEGGHQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNIVAKDVHGNCWKFRHIYRGTPRRHLLTTGWSNFVSQKKLVAGDSIVFLRAKDGDLCVGIRRAKKVAVGDGEVSVSSVVEAVSCGVNGRPFEVVYYPRGSSPEFCVKASVVRDAMKVRWCSGMRFKMPFETEDSSRISWFMGTISSVQLLDPIHWPNSPWRLLQVVWDEPELLQHVKCVNPWLVELVSDIPTYHLSPFSPTRKKPRFLHNQDFHLINNQLPIMPGFPSNYSYSNDNHLVMNHSSKSLMMNIQENNSIAGIQGARHAQLLDLSPSDYPFFNKLPSQSQSQSQSQSHNMHLISPPYCGTYKNNNADISCLLSVGNSSHNLKEEHNEEVKSSSPPSHIFLFGQLIHTEQQCSNGGSSSSNGNNSSDEGTLLKMKSNNASELHLNSSPVEKNPSSNGGSPWYKDQHKSGLGTENVNLLCLAL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04592 589 SUPERFAMILY DNA-binding pseudobarrel domain 118 225 IPR015300 -
Arst5g04592 589 MobiDBLite consensus disorder prediction 518 538 - -
Arst5g04592 589 Gene3D - 121 225 IPR015300 -
Arst5g04592 589 SMART B3_2 123 225 IPR003340 GO:0003677
Arst5g04592 589 Gene3D - 279 352 - -
Arst5g04592 589 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 546 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst5g04592 589 Pfam Auxin response factor 248 325 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst5g04592 589 FunFam Auxin response factor 280 353 - -
Arst5g04592 589 MobiDBLite consensus disorder prediction 550 569 - -
Arst5g04592 589 FunFam Auxin response factor 121 225 - -
Arst5g04592 589 CDD B3_DNA 122 223 IPR003340 GO:0003677
Arst5g04592 589 MobiDBLite consensus disorder prediction 550 574 - -
Arst5g04592 589 ProSiteProfiles B3 DNA-binding domain profile. 123 225 IPR003340 GO:0003677
Arst5g04592 589 Pfam B3 DNA binding domain 123 224 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04592 Arst-Chr5 106882503 106885539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04592 10 521 B3 DNA Binding Superfamily AT2G28350 51.736 5.14e-179 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst5g04592 B3 2.1e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04592 - - ahf:112803082 931.784