Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04591 ATGTCACTCTTTGTAGCAGCATCCCACATGACTCTTCCTCCTACATCATTTACCTCTCTACTATATGAAGACATTGTGCAGTTGGAATGGTTATCCACTTTTGTGGAGGACTCTTTCTCCGGTAGGAGCCTTACCATGAAGAAGGTGGAGCTCCCCACCACCATCACCACAATCAAGGAGGATTTGACTCGTTCACAATTCCGGACATCAAGTCCAGTTTCTGTCCTAGAGAGCAGCAGCTCTTGCTCCAGGGAGAAGGTTGTGGCTCAATGCCCGGAGATTTATATCCCAGTGGTGCCTTGTGGACGTGCGCGAAGCAAGCGGCAGCGCCCGTCGAGCTTCAAGGCACATCCGGTGATGCAACTCATCTCCCCTGCTTCCTCTGTTGGTGAGAACACACAGCCTAATGTCATTCTTAAGGCTTCTTCAGATTCTGAGAATTTCGCGGAGTCTCATCCTGCAATCAAGTTAGCAAAGCAAGCTTCTGGAGAGCACAAGAAGAAAAAGAAAACCAAAGCACCTAATCCTTTAACTGAAGATGATGATCATGATACTAACCAGAATAGTGCGGCAGCTAGGAAATGCATGCACTGTGAGATAACCAAGACACCACAGTGGAGGGCAGGGCCAATGGGGCCAAAAACACTCTGCAATGCCTGTGGTGTTCGCTACAAGTCGGGCCGCCTCTTCCCCGAATACCGGCCTGCTGCCAGTCCAACGTTCTGCCCTGCCGTGCACTCCAATTCACACAAGAAGGTCCTTGAAATGAGAAACAAATTTGGCTTCTCAACTGATTCAGCTGCTTCTCCTGAACTCATTCCAAACACTTCAAGACTTGGATTGGAATACATGTGA 855 0.4889 MSLFVAASHMTLPPTSFTSLLYEDIVQLEWLSTFVEDSFSGRSLTMKKVELPTTITTIKEDLTRSQFRTSSPVSVLESSSSCSREKVVAQCPEIYIPVVPCGRARSKRQRPSSFKAHPVMQLISPASSVGENTQPNVILKASSDSENFAESHPAIKLAKQASGEHKKKKKTKAPNPLTEDDDHDTNQNSAAARKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKKVLEMRNKFGFSTDSAASPELIPNTSRLGLEYM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04591 284 MobiDBLite consensus disorder prediction 158 188 - -
Arst5g04591 284 ProSiteProfiles GATA-type zinc finger domain profile. 189 225 IPR000679 GO:0006355|GO:0043565
Arst5g04591 284 CDD ZnF_GATA 194 251 IPR000679 GO:0006355|GO:0043565
Arst5g04591 284 PANTHER GATA TRANSCRIPTION FACTOR 22 261 - -
Arst5g04591 284 SMART GATA_3 189 239 IPR000679 GO:0006355|GO:0043565
Arst5g04591 284 ProSitePatterns GATA-type zinc finger domain. 195 220 IPR000679 GO:0006355|GO:0043565
Arst5g04591 284 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 192 252 - -
Arst5g04591 284 Gene3D - 189 239 IPR013088 GO:0006355|GO:0008270
Arst5g04591 284 Pfam GATA zinc finger 195 228 IPR000679 GO:0006355|GO:0043565
Arst5g04591 284 MobiDBLite consensus disorder prediction 173 188 - -
Arst5g04591 284 FunFam GATA transcription factor 184 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04591 Arst-Chr5 106854930 106857589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04591 193 282 C2C2-Gata Transcription Factor Family AT3G54810 72.340 1.24e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Arst5g04591 GATA 4.5e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04591 - - gmx:100792644 342.813