LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g04579	ATGGCGTCTAACACATTGATGAGTTCTACTATATCAGCTTTCCCGTCTCTTCTTTCTTCCTCAAAGTCAAGATTTGCCACTTCAATTCCAATCTCATGCTTTGGAAGCAATGTGTCTTCTCGCTTCTCCATGACTGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGACGGTTCAGCTCCAGGTGACTTTGGATTTGACCCTCTTCGTCTTGGAGCAGTACCAGAGAATCTTGAGAGATTCAAGGAGTCTGAACTTATCCACTGCAGATGGGCTATGCTTGCTGTTCCAGGTATGTTGGTACCAGAGGCATTGGGCTTAGGAAATTGGGTGCAAGCTCAGGAATGGGCTGCGAAGCCCGGAGGCCAAGCAACCTACCTTGGAAACCCTGTTCCATGGGGCACCCTCCCCACCATTTTGGTGATTGAATTCCTTGCTATTGCTTTTGTGGAGCACCAAAGAAGCATGGAGAAAGATCCCGAGAAGAAGAAATACCCTGGTGGTGCCTTTGATCCTCTGGGATACTCTAAGGATCCTAAGAAGTTCCACGAATACAAAATCAAAGAAATCAAGAATGGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTGCAACAATCAGCATACCCTGGCACTGGCCCATTGGAGAACTTGGCCACTCACTTGGCTGATCCATGGCACAACAACATTGGAAATGTCATCATTCCCTTTTGA	723	0.4772	MASNTLMSSTISAFPSLLSSSKSRFATSIPISCFGSNVSSRFSMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGAVPENLERFKESELIHCRWAMLAVPGMLVPEALGLGNWVQAQEWAAKPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVIIPF	240

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g04579	240	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	45	236	IPR001344	GO:0009765\|GO:0016020
	Arst5g04579	240	Gene3D	Chlorophyll a/b binding protein domain	49	235	-	-
	Arst5g04579	240	FunFam	Chlorophyll a-b binding protein, chloroplastic	49	235	-	-
	Arst5g04579	240	Pfam	Chlorophyll A-B binding protein	55	209	IPR022796	-
	Arst5g04579	240	SUPERFAMILY	Chlorophyll a-b binding protein	38	238	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g04579	Arst-Chr5	106799824	106801659	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst5g04579	1	196	Chloroplast and Mitochondria Gene Families	AT3G54890	79.293	6.79e-105	300

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g04579	K08907		-	gmx:100305992	443.736