Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04512 ATGTGCTTAGTAACAACGGTGGCGCATCAAAGGGGGTCAGGTGAGTTCATCCGGTTCACGGCGCAGCGTGGCGGTGACGGCGGAGATGAGGAACACGGCGGCGGCGGTGGTGGAAGAAGAAGCAGATCATATGAACAAGAAGTAGGTAACAAGAAAGAAGATGAGGTGGAAAGAATAACAATGCAAGGTTCAATGGAATTGAGTGAGATCATGCTTTCGGCGCTGACAAATAATGTTGTGTCATCAGGTTCTTCTTCTTCTCAATCTCATCAAAGCGGCACCGACTGGTTTGCTGCTGCTTCTCAGCATCATCCTATGATGACGTCAGATTTTGGACACGTGTCATCTTTGTCTTCTTTTACTTCTTCATCTTCTTCTTCTGCTTCTGCTTCCTCTTCATGGGTTGGCCAAAAGAGAGGGCGTGAAGAACAACACCACATGATTGGTGCTTCATCTTCATCTTCTTCTTCCTCTTCTCAATCTTATCAATATCAACATCAACATCATCAGAATTTGGTTCAACATCCTGTTCCTAGATTCTTTGGAACCATTCTTGGTGACTTCAAGGTGCTACCTTCTCATCAACCAGAATCATCTTCAGTGACAGAAGAAGCTTCTTCCATCACCACGGCGGCCACGGCAGCCACCGTAACCACCATGACACCGGCAACGCCGTCGAGCGAGGCGGCATCATATGAAGAAACAGGGGAGAGAAGGAGAAGGTACAGAGGAGTTAGGCAAAGGCCATGGGGAAAATGGGCAGCGGAGATTCGAGATCCACACAAGGCGGCAAGAGTGTGGCTCGGAACATTCGACACGGCGGAAGCCGCCGCAAGAGCCTACGACGAAGCCGCATTGAGATTCAGAGGAAACAGAGCAAAACTCAATTTTCCAGAGAATGTAAGAGCAGTGCCACGCCCAATTCAACCACCTTTCTCTGCCGCCGCCGCCACAACCACCGCCACCACACATTTCCACCACCCTCCGCCGCAGATGTACCATCCAGAACCACTACCACCACCACCATTGGTTCAACATCAGCAGCCACAGTTTCAGGGAAACAATGAGATCAGAGACTATTTGGAATATTCTCTGCTTCTTCAGAGTTCTGGTGATTTTCATCAACATCAACAACAACAAATTAATCAACAACCTTCGAATTTGTTACAACAGTTGTACTATAATTCACAATTGGCGGCGCTTCAATCTTCTTCTTCATCATCATCTTCTTCTTCAGTTGTGCCACCAGCTTCGGTGTTTTCAGCTTCCGCTCAACCTTCCTCTGCTTCACTTCCCCTGTTTCCTAGTCAGCAAATGGTGTTTTTCCGGCCACCGGGAAACCAACCTCACGGCGGCGGAGACGGTGCCGGCGGGTTAAACTTTCTCCCTTCAACTTGGTCAGATACCAGTGGCTATCCACCACCACCTGGTTGA 1434 0.4888 MCLVTTVAHQRGSGEFIRFTAQRGGDGGDEEHGGGGGGRRSRSYEQEVGNKKEDEVERITMQGSMELSEIMLSALTNNVVSSGSSSSQSHQSGTDWFAAASQHHPMMTSDFGHVSSLSSFTSSSSSSASASSSWVGQKRGREEQHHMIGASSSSSSSSSQSYQYQHQHHQNLVQHPVPRFFGTILGDFKVLPSHQPESSSVTEEASSITTAATAATVTTMTPATPSSEAASYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRAVPRPIQPPFSAAAATTTATTHFHHPPPQMYHPEPLPPPPLVQHQQPQFQGNNEIRDYLEYSLLLQSSGDFHQHQQQQINQQPSNLLQQLYYNSQLAALQSSSSSSSSSSVVPPASVFSASAQPSSASLPLFPSQQMVFFRPPGNQPHGGGDGAGGLNFLPSTWSDTSGYPPPPG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04512 477 MobiDBLite consensus disorder prediction 115 137 - -
Arst5g04512 477 Gene3D AP2/ERF domain 240 300 IPR036955 GO:0003700|GO:0006355
Arst5g04512 477 CDD AP2 249 300 IPR001471 GO:0003700|GO:0006355
Arst5g04512 477 MobiDBLite consensus disorder prediction 221 240 - -
Arst5g04512 477 MobiDBLite consensus disorder prediction 19 55 - -
Arst5g04512 477 ProSiteProfiles AP2/ERF domain profile. 241 298 IPR001471 GO:0003700|GO:0006355
Arst5g04512 477 SMART rav1_2 241 304 IPR001471 GO:0003700|GO:0006355
Arst5g04512 477 MobiDBLite consensus disorder prediction 115 170 - -
Arst5g04512 477 MobiDBLite consensus disorder prediction 147 170 - -
Arst5g04512 477 MobiDBLite consensus disorder prediction 440 477 - -
Arst5g04512 477 MobiDBLite consensus disorder prediction 24 55 - -
Arst5g04512 477 Pfam AP2 domain 241 290 IPR001471 GO:0003700|GO:0006355
Arst5g04512 477 SUPERFAMILY DNA-binding domain 241 299 IPR016177 GO:0003677
Arst5g04512 477 PANTHER DNA-BINDING DOMAIN 202 399 IPR044808 GO:0003700|GO:0009873
Arst5g04512 477 MobiDBLite consensus disorder prediction 318 349 - -
Arst5g04512 477 FunFam Ethylene-responsive transcription factor 2 240 299 - -
Arst5g04512 477 MobiDBLite consensus disorder prediction 330 346 - -
Arst5g04512 477 PRINTS Ethylene responsive element binding protein signature 264 280 IPR001471 GO:0003700|GO:0006355
Arst5g04512 477 PRINTS Ethylene responsive element binding protein signature 242 253 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04512 Arst-Chr5 106409944 106412404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04512 185 310 AP2-EREBP Transcription Factor Family AT2G33710 51.587 9.08e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst5g04512 AP2 9.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04512 - - ahf:112803013 602.823