Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04485 ATGGAAGAAGAAGAAGAAGAAGAAGTAGTGAATGCAACAAATTCAAGTGAAGAGAATAATAATAGTAATAAGGGAAGAGAAGAAGAAGGTGGTGGTGGTGGCGACGACGGCGGCGATAAGATGAGCTTTGGTGGAAACCGGTGGCCACGGCAAGAAACTTTGGCTCTCTTAAAGATAAGGTCAGATATGGATTCAGTGTTTCGTGATTCAACTCTCAAAGGTCCACTATGGGAAGAAGTTTCAAGGAAATTAGGAGAGATTGGATACAAGAGAAGTGCAAAGAAATGCAAAGAAAAATTTGAGAATGTTTATAAGTATCACAAGAGAACCAAAGAAGGTAGAACTGGAAAATCTGAAGGAAAAACCTACAAGTTCTTTGATCAATTACAAGCACTTGAGAATCACAATCAATTCAATACACACCCTCCTCCAAAATCATCACAACCTCTTTTGCCAGCAAACCCTACTCTAGTCTATTCTTCGATATTGCCGTCAACAACCGTAACTGCAGCCACAACCAACAACATAAGTAGTACTACTTTTGCACCACATTCCTTTCCCAATAACAACAGCATGAACCTTTTCTCATCACCATCGTCGTCACCAACATCTCCATCATCCTCCACAGCTTCAGATGAAGGGTTGGAAGAGAGGTACAAGAAGAAGAGGAAATGGAAGGACTACTTCAGGAAGCTGACTAGGCAAGTCCTTGCAAAGCAAGAGGAGATGCAAAATAGGTTCTTGGAAGCCATAGATAGAAGAGAAAGAGAAAGAGTAGCACAAGAAGAAGCTTGGAGGTTGCAAGAGATGTCAAGAATCGCCAATGAACACGACGTACTTGTGCAAGAGAGGTCAACAGCTGCGGCCAAAGATGCAGCTGTTATCGCTCTCTTGCACAAGTTATCCGGCCACGAAACACAATCACCACAGACACAGATACAGATACAGAAACAAGAGACAATTAAGGCAAAGAATAGTAGTAGTAGTGAAATAGTTGAAAGAATGAGTTGTTCTTCGTCTTCAAGGTGGCCAAAGGGTGAAGTTCATGCATTGATAAGGCTAAGAACAAGTCTTGATTCGAAGTACATGGAGAATGGACCAAAAGCTCCATTATGGGAGGATATATCAGGTGGAATGCAGAGATTAGGTTACAACCGAAGTGCGAAGAGATGCAAAGAGAAATGGGAGAATATAAACAAGTACTTCAAGAAAGTGAAGGAGAGTAACAAGCAAAGGCGTGAAGATAGCAAGACTTGTCCCTATTTTCATGAGCTTGAAGCTCTTTACAAAGACAAGATTAGCAACAACAACAACAACACCTTTGGAAGTTTCCAGAATAATATGGAGCCTTTGATGGTTCAGCCTGAGCAACAATGGAGGCCACCACCTGAACCCAACAAGGACAACAATAATGCATCAAATGAAGAAGAAGAAGAAGAGTATGATGATGATGGTGTTGAAGAAGAAGAAGAAGAAGAAGAGGGAGATAGTGTTGGAGAAGAAGAAGAAGGATTGAACCGTTATCAGATTGTGACAAATAAAGTTTCATCAGTGGACACAGTTGAATAA 1569 0.4105 MEEEEEEEVVNATNSSEENNNSNKGREEEGGGGGDDGGDKMSFGGNRWPRQETLALLKIRSDMDSVFRDSTLKGPLWEEVSRKLGEIGYKRSAKKCKEKFENVYKYHKRTKEGRTGKSEGKTYKFFDQLQALENHNQFNTHPPPKSSQPLLPANPTLVYSSILPSTTVTAATTNNISSTTFAPHSFPNNNSMNLFSSPSSSPTSPSSSTASDEGLEERYKKKRKWKDYFRKLTRQVLAKQEEMQNRFLEAIDRRERERVAQEEAWRLQEMSRIANEHDVLVQERSTAAAKDAAVIALLHKLSGHETQSPQTQIQIQKQETIKAKNSSSSEIVERMSCSSSSRWPKGEVHALIRLRTSLDSKYMENGPKAPLWEDISGGMQRLGYNRSAKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFHELEALYKDKISNNNNNTFGSFQNNMEPLMVQPEQQWRPPPEPNKDNNNASNEEEEEEYDDDGVEEEEEEEEGDSVGEEEEGLNRYQIVTNKVSSVDTVE 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04485 522 Pfam Myb/SANT-like DNA-binding domain 46 132 IPR044822 -
Arst5g04485 522 Pfam Myb/SANT-like DNA-binding domain 341 428 IPR044822 -
Arst5g04485 522 ProSiteProfiles Myb-like domain profile. 341 399 IPR001005 -
Arst5g04485 522 MobiDBLite consensus disorder prediction 1 47 - -
Arst5g04485 522 MobiDBLite consensus disorder prediction 180 217 - -
Arst5g04485 522 MobiDBLite consensus disorder prediction 21 35 - -
Arst5g04485 522 MobiDBLite consensus disorder prediction 180 212 - -
Arst5g04485 522 Coils Coil 474 494 - -
Arst5g04485 522 PANTHER FI21293P1 15 480 - -
Arst5g04485 522 SMART sant 44 106 IPR001005 -
Arst5g04485 522 SMART sant 339 401 IPR001005 -
Arst5g04485 522 MobiDBLite consensus disorder prediction 473 500 - -
Arst5g04485 522 FunFam Trihelix transcription factor GT-2 343 404 - -
Arst5g04485 522 CDD GT1 46 111 - -
Arst5g04485 522 MobiDBLite consensus disorder prediction 455 522 - -
Arst5g04485 522 ProSiteProfiles Myb-like domain profile. 40 104 IPR001005 -
Arst5g04485 522 FunFam Trihelix transcription factor GT-2 48 109 - -
Arst5g04485 522 CDD GT1 341 406 - -
Arst5g04485 522 Gene3D - 48 109 - -
Arst5g04485 522 Gene3D - 343 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04485 Arst-Chr5 106165566 106167995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04485 38 458 Trihelix Transcription Factor Family AT1G76890 51.037 1.95e-140 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Arst5g04485 Myb_DNA-bind_4 3.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04485 - - ahf:112802983 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04485 5 106165566 106167995 Arst9g04102 9 116191155 116194343 PCT