LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g04480	ATGGACCACAGCGCAGATGCACACCGTACGGACCTGATGACCATAACACGATTCGTGCTCAACGAACAGTCAAAGCACCCTGAATCGCGCGGTGACTTCACCATCTTACTCAGTCACATTGTTCTTGCTTGCAAGTTCGTCTGCTCTTCTGTTAACAAGGCTGGTCTCGCCAAACTCATTGGACTTGCTGGAGAGACTAACGTTCAGGGTGAAGAGCAGAAGAAACTGGATGTGCTTTCCAATGAAGTCTTCATCAAGGCCTTGATTAGCAGTGGCCGAACTAGCATATTGGTTTCGGAAGAAGACGAGGAAGCAACCTTCGTGGAGCCTTCTTTGCGTGGAAAGTACTGCGTCGTTTTTGATCCTTTGGATGGTTCCTCTAACATTGATTGTGGCGTTTCAATTGGCACCATATTTGGGATTTATATGGTGAACGATGTGAATGAACCAACACTAGAAGATGTTTTGCAACCTGGCAAGAACATGTTGGCTGCTGGTTATTGTATGTATGGAAGCTCTTGCACGTTTGTGTTAACCACTGGTAGTGGTGTTAATGGTTTCACGCTTGACCCATCACTTGGTGAGTTCATACTAACTCACCCTGACATCAAGATCCCAAAGAAAGGCAAGATTTATTCAGTGAATGAAGGAAATGCTAAGAACTGGGATGGTCCTACTGCCTTTTATGTGGAGAGATGCAAGTTCCCCAAAGATGGTTCATCACCAAAGTCTCTAAGATATATTGGAAGTATGGTAGCTGATGTTCATCGAACATTGCTATATGGAGGTATCTTTTTGTACCCTGCTGATAAAAAGAGTCCTAATGGAAAACTGCGGGTACTATACGAGGTATTTCCAATGTCATTTTTGATGGAACAAGCAGGGGGACAAGCATTCACTGGCAAACAACGGGCACTTGATTTGATTCCTAAGAAGTTACATGAGAGATCTCCCATATTCCTTGGAAGCTACGATGATGTTGAGGAAATCAAAGCTCTTTATGCTGCTGAGGCCAAGTAG	1020	0.4422	MDHSADAHRTDLMTITRFVLNEQSKHPESRGDFTILLSHIVLACKFVCSSVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALISSGRTSILVSEEDEEATFVEPSLRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMVNDVNEPTLEDVLQPGKNMLAAGYCMYGSSCTFVLTTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAFYVERCKFPKDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALDLIPKKLHERSPIFLGSYDDVEEIKALYAAEAK	339

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g04480	339	ProSitePatterns	Fructose-1-6-bisphosphatase active site.	276	288	IPR020548	GO:0005975\|GO:0042578
	Arst5g04480	339	PIRSF	FBPtase_SBPase	9	339	IPR000146	GO:0005975\|GO:0016791
	Arst5g04480	339	Hamap	Fructose-1,6-bisphosphatase class 1 [fbp].	13	336	IPR000146	GO:0005975\|GO:0016791
	Arst5g04480	339	FunFam	Fructose-1,6-bisphosphatase class 1	204	337	-	-
	Arst5g04480	339	PIRSF	FBPtase	9	339	IPR028343	GO:0042132
	Arst5g04480	339	FunFam	Fructose-1,6-bisphosphatase, cytosolic	4	203	-	-
	Arst5g04480	339	Pfam	Fructose-1-6-bisphosphatase, N-terminal domain	13	201	IPR033391	-
	Arst5g04480	339	Gene3D	-	4	203	-	-
	Arst5g04480	339	Pfam	Fructose-1-6-bisphosphatase, C-terminal domain	205	334	IPR044015	-
	Arst5g04480	339	SUPERFAMILY	Carbohydrate phosphatase	8	334	-	-
	Arst5g04480	339	Gene3D	-	204	339	-	-
	Arst5g04480	339	PRINTS	Fructose-1,6-bisphosphatase signature	310	335	IPR028343	GO:0042132
	Arst5g04480	339	PRINTS	Fructose-1,6-bisphosphatase signature	75	101	IPR028343	GO:0042132
	Arst5g04480	339	PRINTS	Fructose-1,6-bisphosphatase signature	155	178	IPR028343	GO:0042132
	Arst5g04480	339	PRINTS	Fructose-1,6-bisphosphatase signature	212	239	IPR028343	GO:0042132
	Arst5g04480	339	PRINTS	Fructose-1,6-bisphosphatase signature	186	209	IPR028343	GO:0042132
	Arst5g04480	339	PRINTS	Fructose-1,6-bisphosphatase signature	38	65	IPR028343	GO:0042132
	Arst5g04480	339	CDD	FBPase	20	334	IPR000146	GO:0005975\|GO:0016791
	Arst5g04480	339	PANTHER	FRUCTOSE-1,6-BISPHOSPHATASE-RELATED	3	336	IPR000146	GO:0005975\|GO:0016791

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g04480	Arst-Chr5	106117135	106120106	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C3H	Arst5g04480		FBPase	7.6e-82	CL0171

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g04480	K03841		-	oeu:111382940	645.195

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst5g04480	5	106117135	106120106	Arst5g04480	5	106117135	106120106	ECH
	Arst5g04480	5	106117135	106120106	Arst9g04097	9	116119913	116122281	PCT