Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04476 ATGGACCCGAAGTTCATGGGAAAGCCACCTCCGGCCACCACCGTAGAGATAGAACGCATGCCGGAGCGAGGCTCCCACCACCGCCGCTCCCACTCCGACACCTCTTTCCGCTTCGCCGGAAACTTCGACGACCTCCTCCTCTTCGACCCTTCCGACCTCGACATCTCCAACCTCCCTTCTCCTCTTCCACTTCCGACGCCCGCCACCGCAAGCGGCGGAATCCCCATGGCTATCGATTCCGATGAGTCTAGCGGTCAGAGCGGGATGGGAAGAGCCGGTGGCGGTGCTCCGATCGGTCACCTACGGAGCTTGTCAGTCGACTCGGACTTCTTCGATGGCTTCGGGTTCGGCGGAGCCGGAGAGGAGAAGTCAGGCGGGAAAAGTGGCGGTGGAGGAGGAGAGAGAAGAGTTGGGCATCACCGGCATAGTAATTCGATGGATGGATCATCAACGACTTCGTTTGAAGCTGAGTCATCGATGATGGATGGTGTGAAGAAAGCCATGGCACCTGATAAGCTCGCTGAGCTTGCTCTTATTGACCCTAAGCGAGCCAAGAGGATTCTTGCGAATAGACAATCAGCTGCAAGATCAAAGGAGAGAAAGATTCGGTACACAAGTGAGCTTGAGAAGAAGGTGCAGACTCTTCAGACCGAAGCAACTAACCTCTCTGCTCAACTTACCATGCTCCAGAGAGACACGACAGATTTAACTGCGGAGAATAAGGAGCTCAAACTGCGGTTGGAGGCTATGGAACAAGAAGCACAGCTTAGAGAAGATCTCAATTCGGCATTGAAGGAAGAATTGCAGCGCCTTAGAGAACAGAGTAACCGCTTGGGTGCTATGAGTGGTGGTAACCATAATTTTGGTGGTATGTTCTCTCAATTGGCTTCTCAATTAGCCATGCAACAGCTGAGTAATCATCCTCCGCCGCAACAGCAGCAGGTCGGCGTGCCTCCTCATCCCTCTGATCAGCCTTTCCAAGGGCAGCACGGGCAGCGACGCCCGAGTTTCATGGACTTCAATCAGAAGAAGTAG 1035 0.5411 MDPKFMGKPPPATTVEIERMPERGSHHRRSHSDTSFRFAGNFDDLLLFDPSDLDISNLPSPLPLPTPATASGGIPMAIDSDESSGQSGMGRAGGGAPIGHLRSLSVDSDFFDGFGFGGAGEEKSGGKSGGGGGERRVGHHRHSNSMDGSSTTSFEAESSMMDGVKKAMAPDKLAELALIDPKRAKRILANRQSAARSKERKIRYTSELEKKVQTLQTEATNLSAQLTMLQRDTTDLTAENKELKLRLEAMEQEAQLREDLNSALKEELQRLREQSNRLGAMSGGNHNFGGMFSQLASQLAMQQLSNHPPPQQQQVGVPPHPSDQPFQGQHGQRRPSFMDFNQKK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04476 344 Pfam bZIP transcription factor 182 240 IPR004827 GO:0003700|GO:0006355
Arst5g04476 344 Coils Coil 205 281 - -
Arst5g04476 344 MobiDBLite consensus disorder prediction 19 34 - -
Arst5g04476 344 MobiDBLite consensus disorder prediction 64 96 - -
Arst5g04476 344 MobiDBLite consensus disorder prediction 117 158 - -
Arst5g04476 344 MobiDBLite consensus disorder prediction 302 344 - -
Arst5g04476 344 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 332 - -
Arst5g04476 344 MobiDBLite consensus disorder prediction 144 158 - -
Arst5g04476 344 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 243 IPR004827 GO:0003700|GO:0006355
Arst5g04476 344 SMART brlzneu 178 242 IPR004827 GO:0003700|GO:0006355
Arst5g04476 344 MobiDBLite consensus disorder prediction 1 36 - -
Arst5g04476 344 SUPERFAMILY Leucine zipper domain 182 234 IPR046347 GO:0003700|GO:0006355
Arst5g04476 344 MobiDBLite consensus disorder prediction 302 336 - -
Arst5g04476 344 Gene3D - 181 235 - -
Arst5g04476 344 CDD bZIP_plant_RF2 183 232 IPR044759 GO:0003700|GO:0006355
Arst5g04476 344 FunFam Transcription factor VIP1 181 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04476 Arst-Chr5 106079260 106082070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04476 7 326 bZIP Transcription Factor Family AT1G43700 48.148 1.62e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst5g04476 bZIP_1 1.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04476 K20557 - gmx:778142 410.609