Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04470 ATGGATTTCGTTGAAGGTGTCGGAGAGAGCTCGTCGCCGCCGCGGACGTTCGGCGGTTTCAGCAACTACGACGTCAGGAACGATGTCTACAATCGCTTGGTGGAAACCGGCCACGATCAGGCTGTGTCGAATCCCGATTTTCGAGAACTGCTTGAAGCTCACTTCAATCGCTTGCCTCCGAGTTATGGGCTTGATGTTAATGTGGATAGAGCTGAAGATGTTCTATTGCATCAGAGTCTTCTTAGTTTGGCAAGGGACCCGGAAAAGCGGCCTGTCATCCATGTACGCTTCTTGGAGAATATTTCAGCTCAGACAGATGGTGAAGAGCAAGAAATTGCAAGTTCTCATTCTAGCCCAGGGCCATCTAATGATGCAACTAATGGAGGAGCTGTATCCTCTCATAAGAGGTGTGAAATCCAGTTTATGTTTAGTACTCTATATATACACAAGACAAGGGATCATGCAACTGACTTTGAGCCTTGCTCGAAGCTTGAGGGCCTAAATTTGGATGTTAGAAAGAATTCCAAGGATATAGAGGAAAGATTTCTTTCAGACAACCTATCCCAGAGGCAGGAGCATTTAAATTTCCCAATCCATGAAGTGATATTTTCCACCCTTGACAAGCCAAAGCTTTTAAGCCAGCTGTCAGCTTTGCTGTCTGATATTGGGCTTAACATCCGTGAAGCACATGTTTTCTCCACCACTGATGGCTACTCCCTCGATGTATTTGTGGTGGATGGATGGCCAGTAGAGGAAACAGATGGTTTGTATGAAGCTATGGAAAAAGCAGTTGCAAGAAGTGAGGGATCATGGTCACGCTCTTCAAATTCTCTTTCAGCTGTGGAGAAACCCTTAGCTGCAGAAGCAAAATGTGGATATTGGGAGATAGACAAGAGGTTGTTGAAGATAGGAGAAAGAATAGCATCTGGATCCTGTGGAGATTTGTATCATGGGGTTTATTTAGGGCAAGATGTTGCTGTTAAGGTTATGAGATCTGACCAATTGAATGATGCTTTGGAGGATGAATTTGCTCAAGAAGTTACAATTCTAAAGCAGGTGCACCATAAAAATGTTGTTCGTTTCATTGGTGCATGTACAAAGTCTCCAAATTTGTGTATAGTAACAGAGTATATGCCCGGAGGAAGTCTGTATGATTACTTGCACAAAAACCATAATGTCTTGGAGCTATCTCCATTACTGAAGTTTGCAATTGATGTTTGCAAGGGTATGGAGTATTTACATAGAAACAACATAATTCACAGGGATTTGAAGACTGCAAATCTGCTGATGGATACAGACAATGTTGTTAAAGTAGCAGATTTCGGCGTTGCTCGCTTCCTCAATCAGGAGGGAGTGATGACAGCAGAAACTGGGACATATAGATGGATGGCACCAGAGGTTATAAACCATCAGCCTTATGATCAGAAAGCAGATGTGTTCAGTTTTTCTATAGTACTCTGGGAACTAGTGACGGCAAAGGTGCCTTATGATACAATGACTCCGTTACAAGCTGCCTTGGGTGTCAGACAGGGACTGCGCCCGGAACTTCCAAAGCATGGTCACCCTAAACTATTATATTTGATGCAAAGATGTTGGGAAGCAGATCCAAGCAACCGGCCGAGTTTCCAGGAGATAACGGTTGAACTTGAGAATCTTTTACAACAAGTTGAGAATGATTCACAAGCTAATGGTGCTTGA 1698 0.4352 MDFVEGVGESSSPPRTFGGFSNYDVRNDVYNRLVETGHDQAVSNPDFRELLEAHFNRLPPSYGLDVNVDRAEDVLLHQSLLSLARDPEKRPVIHVRFLENISAQTDGEEQEIASSHSSPGPSNDATNGGAVSSHKRCEIQFMFSTLYIHKTRDHATDFEPCSKLEGLNLDVRKNSKDIEERFLSDNLSQRQEHLNFPIHEVIFSTLDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEETDGLYEAMEKAVARSEGSWSRSSNSLSAVEKPLAAEAKCGYWEIDKRLLKIGERIASGSCGDLYHGVYLGQDVAVKVMRSDQLNDALEDEFAQEVTILKQVHHKNVVRFIGACTKSPNLCIVTEYMPGGSLYDYLHKNHNVLELSPLLKFAIDVCKGMEYLHRNNIIHRDLKTANLLMDTDNVVKVADFGVARFLNQEGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLYLMQRCWEADPSNRPSFQEITVELENLLQQVENDSQANGA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04470 565 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 119 555 - -
Arst5g04470 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Arst5g04470 565 FunFam Serine/threonine-protein kinase isoform 1 291 379 - -
Arst5g04470 565 Gene3D Transferase(Phosphotransferase) domain 1 379 564 - -
Arst5g04470 565 CDD STKc_MAP3K-like 307 549 - -
Arst5g04470 565 MobiDBLite consensus disorder prediction 104 131 - -
Arst5g04470 565 SMART serkin_6 301 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04470 565 ProSiteProfiles ACT domain profile. 200 274 IPR002912 -
Arst5g04470 565 Gene3D Phosphorylase Kinase; domain 1 290 378 - -
Arst5g04470 565 PRINTS Tyrosine kinase catalytic domain signature 520 542 IPR001245 GO:0004672|GO:0006468
Arst5g04470 565 PRINTS Tyrosine kinase catalytic domain signature 458 468 IPR001245 GO:0004672|GO:0006468
Arst5g04470 565 PRINTS Tyrosine kinase catalytic domain signature 477 499 IPR001245 GO:0004672|GO:0006468
Arst5g04470 565 PRINTS Tyrosine kinase catalytic domain signature 412 430 IPR001245 GO:0004672|GO:0006468
Arst5g04470 565 PRINTS Tyrosine kinase catalytic domain signature 375 388 IPR001245 GO:0004672|GO:0006468
Arst5g04470 565 Pfam Protein tyrosine and serine/threonine kinase 301 548 IPR001245 GO:0004672|GO:0006468
Arst5g04470 565 ProSiteProfiles Protein kinase domain profile. 301 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04470 565 MobiDBLite consensus disorder prediction 104 130 - -
Arst5g04470 565 SUPERFAMILY Protein kinase-like (PK-like) 290 554 IPR011009 -
Arst5g04470 565 SUPERFAMILY ACT-like 199 266 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04470 Arst-Chr5 106035192 106043718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04470 24 561 MAP Kinase Kinase Kinase AT4G35780 48.364 7.20e-178 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Arst5g04470 PK_Tyr_Ser-Thr 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04470 - - gmx:100782737 931.398