Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04461 ATGAGGTACCGCGGCGTCAGGCGGAGGCCATGGGGCCGTTATGCCGCCGAGATAAGGGACCCTCAGTCCAAGGAGCGCCGTTGGCTGGGGACTTTCGACACTGCGGAGGAAGCCGCCTGCGCCTACGACTGCGCCGCCAGAGCCATGCGTGGCCATAAGGCAACCACCAACTTCGTGTACCATACTTTACCTTCTTACTCTTCTTCCATCACCATCACCAACAACCATAGCAATCTCCTTAACTGCCATAACCACTTCAGCTTCCCTTATCATCATAACCAACTCTTCAACGGTCATAAACGCCACTTCGGGGTTTGGTCTGACCCTTTCTCTGCTTCAACCTTCCAGGAACAGCGAAACCTTGACTCCATCAACATGCTTCTCCACCGAGACTTGGTAGCCTCTTCTTCCTCCGGCAATTTATCCTACAACATGGGCAGTTTTGTCAATTCACATCCTGGCAATGTTGCTAATAACTACTCCGCCGCACCTTGTTCTGACACAAGCAATCTCGGTTGTGACGGTGGACGCAATAAGACCGATAATACTAACAATAATGAAGCTGACGATGGTGGCGAAGAAGACTCAAAGGAGCAATTCTATGAAGGTTCAGGGTCGTCAGGGTTGTTGGAAGAAATAGTTAAGGGTTTCTTGAAGAAAAAGCCAAAGCTCAATAAATGTGAGAGATTGTTAGGTACCAGGACCACTGCTTCAGACGGTTCTTGCCACTCACCATTTCCTCCTCCTCCTCCTCTGGTTGTTTTCCGCGAGGAGTCGAAGAAAGACGATGGTTTCGGCGTTCATTTGGATCAACAGGGTTTCCAATACATGCAGCAGCTTGGTGGTGGTTTCAATAATGGTTTTAGCAATATGGTTATGCTGCCTAACATGATGATGAATAACGATAATGAAGTAGAGTGCTCGATCGTAGAAAACCTTTTTCCGGATGCATAA 954 0.4853 MRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGHKATTNFVYHTLPSYSSSITITNNHSNLLNCHNHFSFPYHHNQLFNGHKRHFGVWSDPFSASTFQEQRNLDSINMLLHRDLVASSSSGNLSYNMGSFVNSHPGNVANNYSAAPCSDTSNLGCDGGRNKTDNTNNNEADDGGEEDSKEQFYEGSGSSGLLEEIVKGFLKKKPKLNKCERLLGTRTTASDGSCHSPFPPPPPLVVFREESKKDDGFGVHLDQQGFQYMQQLGGGFNNGFSNMVMLPNMMMNNDNEVECSIVENLFPDA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04461 317 FunFam Ethylene-responsive transcription factor 2 2 60 - -
Arst5g04461 317 Pfam AP2 domain 2 52 IPR001471 GO:0003700|GO:0006355
Arst5g04461 317 SMART rav1_2 2 65 IPR001471 GO:0003700|GO:0006355
Arst5g04461 317 SUPERFAMILY DNA-binding domain 2 60 IPR016177 GO:0003677
Arst5g04461 317 Gene3D AP2/ERF domain 1 60 IPR036955 GO:0003700|GO:0006355
Arst5g04461 317 ProSiteProfiles AP2/ERF domain profile. 2 59 IPR001471 GO:0003700|GO:0006355
Arst5g04461 317 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 195 - -
Arst5g04461 317 CDD AP2 2 58 IPR001471 GO:0003700|GO:0006355
Arst5g04461 317 MobiDBLite consensus disorder prediction 171 203 - -
Arst5g04461 317 PRINTS Ethylene responsive element binding protein signature 3 14 IPR001471 GO:0003700|GO:0006355
Arst5g04461 317 PRINTS Ethylene responsive element binding protein signature 25 41 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04461 Arst-Chr5 105951532 105952485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04461 1 220 AP2-EREBP Transcription Factor Family AT1G24590 43.439 1.09e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst5g04461 AP2 1.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04461 - - aip:107641556 527.709