Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04446 ATGGATGATTTTTGGAGCCTGATTTGTATGGACTATGATTGTTCCAAGGCCAGAGAAACTCCTTTCTGTAATGATTTCAAGTTCTTGCAAGATCATTCCAAATGCATCAACAATTTGTTGATCATTTGCTTTGATATCTTGCTGCTGATCATGCTGTCATTCACTATGATCAAGAGGACTTCATCAACTCCATTTCATGGCCAAACGCGAGCCGAAAGATATTCAAATTTGCAGCTAGTTTCTGCCACAAGCAATGGAGTTCTTGGCTTGGTGCATTCATGCTTAGGAATTTGGATTTTGGAGGAGATGATAAGAAAAAACCACACTGCATTGCCTCTTAATTGGTGGTTGGTAGAATTCTTTCAAGGAATCACATGGCTTTTAGCATCCTTCACAGTATTAAGTCTTTGGCTTAAACATTATCCGGTAACATCATTGCGCCTTTTTGCTGTTCTTCTACTTTTAGCTTCTAGCATACTATGTTCTTTGTCCTTGTTCTATGCAATTAGCAGCAGAGGACTCTCCCTGAAGATAGCTCTAGATGTTCTATCTTTTCCAGCATCAATCTTAGTGCTGTTATGCACATTCAAAGTATGTCATTGCGACGAAAAATGGAAGGAAAAGGATGAAAAATTTTGGTGGTTGAATCCATTGATGAAAAAAGGTAAAGAGAAAACACTTGAGGATGAGGATATCCCAAAGCTGCACGAGCCGGATCGAGCAGAAAGTTGCTATTCTGTGTTTATAGAACAACTTAACAAACAGAAACAAAAAGAACCAACACTGCAGCCATCAGTATTTTGGACTATAATGTCCTGCCACTGGAGAGAGATTTGGATTTCAGGATTCTTTGCATTTATTAAGGTAGTTACTCTGTCTTGTGGTCCCCTGCTTTTGAATGCATTTATATTGGTTGCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATGTGTTGGCCATTTCACTTTTCTTTGCAAAGATCATAGAATCCTTGTCTCAAAGGCAATGGTATTTTCGATGTAGACTCGTTGGTATGAAGGTTAGATCTCTTCTCACTGCAGCCATCTATAAGAAACAATTGAAGCTATCCAATGCTGCCAGATTGGAGCATTCTGGTGGTGAGATAATGAATTATGTGACTGTTGATGCATATAGGATTGGAGAATTTCCATTTTGGTTTCATCAGATGTGGACAACAAGCTTCCAAATATGCATTGCTTTGGTGATTCTTGTCCGAGCCATTGGACTCGCGACAATAGCCTCAATGGTAGTAATAATTCTCACTGTACTTTGCAATGCTCCATTGGCAAAGCTACAGCAGAAGTTTCAAAGCAAGCTCATGGTGGCACAAGATGAGAGATTGAAGGCTAATTCTGAGGCTCTTGTGAATATGAAAGTTCTGAAGCTATATGCATGGGAGAAACATTTTAAGAAGGCTATTGAAGGCTTAAGGAATGTGGAACTTGAAATGTTATCAGCAGTGCAATCAAGAAAGGCCTACAACATCTTTCTCTTCTGGTCTTCGCCTATTCTGGTGTCCGCGGCTTCCTTTGCTGCATGCTACTTCTTGGAGATTCCTTTGCATGCAAACAATGTTTTCACTTTTGTGGCAACACTGCGCCTTGTGCAAGAGCCAATCACAACCATCCCAGATGTTATTGGAGTGGTTATTCAATCGAAAGTTGCATTCGCTCGAATTGGGAAGTTTCTTGAGGCATCTGAATTGCAGAATGCAAATTGCAGGAAGAGTTGTGTTGATGATAACCTCAGAGGCTCAATTTCAATCAAGTCTGCTGATTTTTCATGGGAAGATAATGTGTCAAAACCAACACTTAGAAACATAAATTTGGAGGTTAGACATGGACAAAAGGTAGCAATTTGTGGAGAAGTTGGATCAGGAAAATCAACTCTCTTAGCAACAATTCTTGGAGAAGTTCCAAATACAAAGGGAACTATTGAAGTTTATGGCAGTTTTGCATATGTTTCTCAAACAGCATGGATACAGTCAGGTACAATAAGGGAAAATATTTTGTTTGGAGCAGATTTGGATCCACAAAGATATGAAGAGACACTTTATAGATCTTCACTGATAAAGGATCTTGAGTTGTTTCCCTATGGAGATCTTACCGAAATAGGCGAGAGGGGAGTTAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAGCTCGCTCGTGCGCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCTCACACAGCCACAAATTTGTTTAAGGAATATATCATGGAAGGACTTGCAGGGAAGACTGTGTTACTTGTGACTCATCAAGTTGACTTCCTACCAGCTTTTGATTCTGTTATGTTGATGTTAGATGGGGAAATTCTACAAGCTGCTCCTTATCATCATCTATTGGAATCAAGCCGAGAATTCCAAGAACTCGTCGAGGCTCACAAGAAGACTGCTGGTGCTGACCATCAAGTTGACACTCCTTCTTCCAAGAGAGATTCAACTTCTGGCAGAGAGATTAAGCAAGATTTCTTGGAGAAGAAGTTAGAAGCTTCAAACGAAAATAAGTTGATTAAGCAAGAAGAAAGAGAGATAGGAGACACAGGCTTGAAGCCTTACATTCAGTATCTGAATCAGATGAAGGGATACATATACTTTGCTGCCGCTACTCTTTGTCACATTTTATTTGTAACTGGCCAAATAATTCAAAACTCATGGATGGCTGCTAATGTTGACAACCCTCATATCAAAACTCTGAAATTGATCTTAGTCTACTTGTTGATAGGAGTTGTTTCAATTGTTTTTATGTTAATCAGAACTTTTCTTATAGTTGCTTTAGGTCTTCTATCATCAAAACATCTATTTTCACAGTTGATGAACTCCCTTTTCCGCGCACCGATGTCTTTTTATGACTCCACACCTTTGGGAAGGATACTTAGCAGGGTATCTGCAGATATGAGCATTGTGGATCTTGATGTACCATTTTTCCTTGCATATACTGTGGGGGGTACTACAAATTTTTATTCTAATCTTGCAGTTTTATCATTTGTGAGTTGGCAAGTCTTGTTTGTTGCCATACCACTGGTTTTTGCTGCGATTCAATTGCAGAAATACTACTTTGCTACTGCAAAAGCATTGATGAGGTTAAATGGCACAACAAAATCATTTGTAGCTAATCATGTAGCAGAAACTAATGCTGGAGCTGTGACAATAAGGGCCTTTAAGGAGGAAGATCGCTTTTTCAAGAAGAATCTTGATCTGATTGATGTCAATGCTAGTCCATTCTTCCATAGTTTCACTTCAAATGAATGGTTGATCCAACGGTTAGAAACAATCAGTGCTGTTGTTCTATCTGCTGCAGCACTTTGCATGGTTGTGCTTCCACCTGAGACTTTCCCCGCCGGATTTATTGGCATGGCACTCTCTTATGGCCTTTCACTGAACAATTCCCTTGTATTTTCAATTCAATTTCAATGCACTCTAGCAAATTATATAGTATCTGTAGAGAGGATAAATCAATATATGTATATACCAAGTGAGGCCCCAGAAGTTATAGAAGGAAATCGCCCTCCGGTTAATTGGCCAGTTGCAGGCAAAGTAGAAATTAGTAACTTGCAGATAAGATACAGGGCTAATGGACCACTTGTACTCCATGGAATTACATGCACATTTGAAGGAGGACACAAGATTGGTATTGTTGGCAGGACAGGAAGTGGGAAGTCCACTCTTATTAGTGCTTTGTTTCGCCTTGTCGAGCCGGCCGGTGGAAGAATTGTAATGGATGGTGTAGACATATCCTCGATCGGCCTTCATGATTTGAGGTCACATTTAGGTGTTATACCTCAGGATCCTACTCTTTTTAATGGAACAGTTAGATATAATTTGGACCCTTTGTCTCAACATTCTGATGAAGAGATATGGGAGGTTCTTGGAAAGTGTCAGTTGCGAGAAGCCGTGCAAGAAAAAGAAAAGGGCTTAGACTCCTCAGTTGTTGAAGATGGATCGAATTGGAGTATGGGACAAAGGCAGTTATTCTGTCTAGGCCGCGCCCTTTTGAGGCGAAGTAGGATATTGGTGCTAGATGAAGCAACGGCATCAATTGATAATGCAACAGATCTTATTTTGCAGAAAACAATTAGAACAGAATTTGCAGATTGTACAGTGATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCACCAAGGTTCTCTCCATAAGTGATGGAAAATTGATAGAGTATGATGAGCCAAAGAAGTTAATGAAGAGAGAAGGGTCATTGTTTGGGAAGCTTGTGAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCTCATTGA 4350 0.3986 MDDFWSLICMDYDCSKARETPFCNDFKFLQDHSKCINNLLIICFDILLLIMLSFTMIKRTSSTPFHGQTRAERYSNLQLVSATSNGVLGLVHSCLGIWILEEMIRKNHTALPLNWWLVEFFQGITWLLASFTVLSLWLKHYPVTSLRLFAVLLLLASSILCSLSLFYAISSRGLSLKIALDVLSFPASILVLLCTFKVCHCDEKWKEKDERXFWWLNPLMKKGKEKTLEDEDIPKLHEPDRAESCYSVFIEQLNKQKQKEPTLQPSVFWTIMSCHWREIWISGFFAFIKVVTLSCGPLLLNAFILVAEGNESFKYEGYVLAISLFFAKIIESLSQRQWYFRCRLVGMKVRSLLTAAIYKKQLKLSNAARLEHSGGEIMNYVTVDAYRIGEFPFWFHQMWTTSFQICIALVILVRAIGLATIASMVVIILTVLCNAPLAKLQQKFQSKLMVAQDERLKANSEALVNMKVLKLYAWEKHFKKAIEGLRNVELEMLSAVQSRKAYNIFLFWSSPILVSAASFAACYFLEIPLHANNVFTFVATLRLVQEPITTIPDVIGVVIQSKVAFARIGKFLEASELQNANCRKSCVDDNLRGSISIKSADFSWEDNVSKPTLRNINLEVRHGQKVAICGEVGSGKSTLLATILGEVPNTKGTIEVYGSFAYVSQTAWIQSGTIRENILFGADLDPQRYEETLYRSSLIKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFKEYIMEGLAGKTVLLVTHQVDFLPAFDSVMLMLDGEILQAAPYHHLLESSREFQELVEAHKKTAGADHQVDTPSSKRDSTSGREIKQDFLEKKLEASNENKLIKQEEREIGDTGLKPYIQYLNQMKGYIYFAAATLCHILFVTGQIIQNSWMAANVDNPHIKTLKLILVYLLIGVVSIVFMLIRTFLIVALGLLSSKHLFSQLMNSLFRAPMSFYDSTPLGRILSRVSADMSIVDLDVPFFLAYTVGGTTNFYSNLAVLSFVSWQVLFVAIPLVFAAIQLQKYYFATAKALMRLNGTTKSFVANHVAETNAGAVTIRAFKEEDRFFKKNLDLIDVNASPFFHSFTSNEWLIQRLETISAVVLSAAALCMVVLPPETFPAGFIGMALSYGLSLNNSLVFSIQFQCTLANYIVSVERINQYMYIPSEAPEVIEGNRPPVNWPVAGKVEISNLQIRYRANGPLVLHGITCTFEGGHKIGIVGRTGSGKSTLISALFRLVEPAGGRIVMDGVDISSIGLHDLRSHLGVIPQDPTLFNGTVRYNLDPLSQHSDEEIWEVLGKCQLREAVQEKEKGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLSISDGKLIEYDEPKKLMKREGSLFGKLVKEYWSHFQSAESH 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04446 1450 CDD ABC_6TM_ABCC_D1 281 568 IPR044746 GO:0140359
Arst5g04446 1450 FunFam ABC transporter C family member 10 577 831 - -
Arst5g04446 1450 CDD ABC_6TM_ABCC_D2 890 1179 IPR044726 GO:0140359
Arst5g04446 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 280 560 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g04446 1450 FunFam ABC transporter C family member 5 853 1185 - -
Arst5g04446 1450 ProSitePatterns ABC transporters family signature. 720 734 IPR017871 GO:0005524|GO:0016887
Arst5g04446 1450 Gene3D ABC transporter type 1, transmembrane domain 250 576 IPR036640 GO:0005524|GO:0016020
Arst5g04446 1450 Gene3D ABC transporter type 1, transmembrane domain 851 1185 IPR036640 GO:0005524|GO:0016020
Arst5g04446 1450 SUPERFAMILY ABC transporter transmembrane region 875 1184 IPR036640 GO:0005524|GO:0016020
Arst5g04446 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 900 1167 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g04446 1450 SMART AAA_5 622 795 IPR003593 GO:0016887
Arst5g04446 1450 SMART AAA_5 1230 1422 IPR003593 GO:0016887
Arst5g04446 1450 SUPERFAMILY ABC transporter transmembrane region 268 568 IPR036640 GO:0005524|GO:0016020
Arst5g04446 1450 Gene3D - 1188 1439 IPR027417 -
Arst5g04446 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1204 1438 IPR003439 GO:0005524
Arst5g04446 1450 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 212 1438 - -
Arst5g04446 1450 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 212 1438 - -
Arst5g04446 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 590 818 IPR027417 -
Arst5g04446 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1194 1431 IPR027417 -
Arst5g04446 1450 CDD ABCC_MRP_domain2 1202 1422 - -
Arst5g04446 1450 CDD ABCC_MRP_domain1 595 795 - -
Arst5g04446 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 597 818 IPR003439 GO:0005524
Arst5g04446 1450 FunFam ABC transporter C family member 10 263 576 - -
Arst5g04446 1450 Pfam ABC transporter 1221 1369 IPR003439 GO:0005524
Arst5g04446 1450 Pfam ABC transporter 613 747 IPR003439 GO:0005524
Arst5g04446 1450 Gene3D - 590 824 IPR027417 -
Arst5g04446 1450 FunFam ABC transporter C family member 3 1187 1439 - -
Arst5g04446 1450 Pfam ABC transporter transmembrane region 280 541 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g04446 1450 Pfam ABC transporter transmembrane region 889 1127 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04446 Arst-Chr5 105745968 105752478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04446 589 840 Calmodulin-binding Proteins AT2G36910 30.403 8.73e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04446 K05666 - gmx:100787314 2200.25