Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04436 ATGGAGCAGAAGCATGTTCTGTTGTCAGCATTGAGTGTTGGTGTTGGGTTGGGAGTGGGTCTTGGGTTGAGTACAGGACAAGCTGTTCAGAAATGGGTTGGTGGAAGCAAGCTTGATTCTGATGAGATTTCTGGGGACCTCATTGTTCTTGAGCTCAAGAAGCTTCTGCTTGATGGCAGAGACAGCAGAATCACATTTGATGACTTCCCTTATTACTTAAGCGAAAAAACTCGAGTGTTGTTGACAAGTGCTGCACATGTTCATTTGAAGCATCTTGATTTTTCCAAGCACACCAGGAACCTTTCTCCAGCAAGCAGAGCTATTTTGCTATCTGGTCCTGGAGAGCTATACCAGCAAATGCTTGCCAGGGCTTTGGCACATAGCTTTGAATCGAAGTTGCTGTTGCTAGATATTAATGACTTCTCAGTGAAGATGCAGAGCAAATATGGATGTCCAAGAAAAGAACCTTCCATATCAGAGATGACTTTCGAGCGAATGTCCGGTTTATTTGGTTCCCTTTCAATCCTCCCTTCAACTGCTGAAACTACAGGTACTTTACATCAACAAAGTGTCGATGCTGAAAGTTCGAAAAATGTTTCAAAACTTCGGAGGAATGGCTCTGCTGCATCTGATATAAGTAGTGCTGCTTCTCATTGTGGTGTAGCAAGTCCAGCTCCTTTAAAGCGCACAAGTAGCTTGTGTTTCAATGAAAAGCTATTTGTTCAGTCACTTTACAAGGTCTTGGTTTCTGTCTCAGAAACTGGTCCCATCATTTTATACATTAGGGATGTTGAGAGGCTTGTTCTACAATCACCAAGGTTATACAACTTGTTACATAAAATGATAAAGAAGCTTTCAGGATCTGTGATAGTACTTGCTTCACATTTAATAGATACAGAAGATGAATGCAAAGAAATTGATGAAAGACTCACTATGGTGTTCCCATACAACATTGACATAAATCCTCCTGAAGATGCAACTCATCTTTGCAACTGGAAATCTCAACTGGAAGAGGACATGAGAATGATTCAATTCCAAGATAACAAAAACCACATCACAGAAGTACTCGCAGCGAATGACATCGATTGTTATGACCTGTCATCAATATGCCATGCAGACACTATGGTACTCAGTACTTACATTGAAGAAATTGTGGTATCTGCAATATCTTACCATTTGATGAATACCAAGGATCCTGAATACCGAAATGGAAAGCTAGTTATATCAGCCAACAGTTTGTCCCATGGATTGAGCCTGTTCCAAGAAGGCAAGAGTAGTGGGAATTTGAAGACTAATGATTCAAACAAGGAAAATGCTGATGGCATTGCCGGAGCAAATGTTCGGTGTGATGGCCAGGCACCTGAAAACAAAAATGAAACATCTATCCCTGTAACAAAGAAAGATGGCGAAAATACTGCTCCTGCAAAAGCAGAAGTCCCTGACAACGAGTTTGAAAAGCGCATTCGACCAGAAGTTATTCCTGCAAATGAGATAGGAGTTACTTTTGCAGATATTGGTTCATTGGATGAGATCAAAGAATCACTTCAAGAACTGGTCATGCTTCCTCTTAGAAGACCAGACCTCTTCAAAGGTGGACTTCTGAAGCCATGTAGAGGCATATTGCTTTTTGGACCTCCTGGGACTGGAAAGACAATGCTGGCAAAGGCAATTGCGAATGAAGCCGGAGCTAGTTTCATCAATGTATCAATGTCCACCATCACTTCAAAGTGGTTTGGAGAAGATGAAAAGAATGTTAGAGCTTTGTTCACACTGGCTGCAAAGGTTGCCCCTACTATCATCTTTGTTGATGAAGTTGACAGCATGCTTGGACAGCGCACTCGAGTTGGAGAGCATGAAGCCATGAGGAAGATCAAGAATGAGTTCATGACACATTGGGATGGACTATTAACTAGACCTGGTGAACAAATTCTGGTTCTTGCTGCAACTAACAGGCCATTTGATCTTGATGAAGCTATTATAAGACGATTCGAGCGCAGGATTATGGTTGGTCTTCCATCTGTTGAGAACAGAGAAATGATCCTGAAAACTCTCCTAGCTAAGGAAAAACACGAAAACTTAGACTTCAAAGAGCTTGCAGCCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACCGCGGCTTATCGACCTGTTAGGGAGTTGTTACAGCAGGAGAGAAAGAAGGATATGGAAAAGAAGAAAAAAGAGACAGAAGGCCAAAGCTCTGAAGATACATCAGAGAATAAAGAAGATCATCAAATTACTCTGAGGTCTTTAAACATGGAAGACATGAGACAGGCAAAGAGTCAGGTGGCTGCTAGTTTTGCATCCGAAGGAACGGTTATGAATGAGCTGAAACAATGGAATGAATTATATGGAGAAGGAGGTTCAAGGAAGAAGCAGCAACTCACTTACTTCCTTTAA 2436 0.415 MEQKHVLLSALSVGVGLGVGLGLSTGQAVQKWVGGSKLDSDEISGDLIVLELKKLLLDGRDSRITFDDFPYYLSEKTRVLLTSAAHVHLKHLDFSKHTRNLSPASRAILLSGPGELYQQMLARALAHSFESKLLLLDINDFSVKMQSKYGCPRKEPSISEMTFERMSGLFGSLSILPSTAETTGTLHQQSVDAESSKNVSKLRRNGSAASDISSAASHCGVASPAPLKRTSSLCFNEKLFVQSLYKVLVSVSETGPIILYIRDVERLVLQSPRLYNLLHKMIKKLSGSVIVLASHLIDTEDECKEIDERLTMVFPYNIDINPPEDATHLCNWKSQLEEDMRMIQFQDNKNHITEVLAANDIDCYDLSSICHADTMVLSTYIEEIVVSAISYHLMNTKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNDSNKENADGIAGANVRCDGQAPENKNETSIPVTKKDGENTAPAKAEVPDNEFEKRIRPEVIPANEIGVTFADIGSLDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTRPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKHENLDFKELAAMTEGYTGSDLKNLCITAAYRPVRELLQQERKKDMEKKKKETEGQSSEDTSENKEDHQITLRSLNMEDMRQAKSQVAASFASEGTVMNELKQWNELYGEGGSRKKQQLTYFL 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04436 811 SMART AAA_5 536 673 IPR003593 GO:0016887
Arst5g04436 811 ProSitePatterns AAA-protein family signature. 643 662 IPR003960 GO:0005524|GO:0016887
Arst5g04436 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 354 IPR027417 -
Arst5g04436 811 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 499 674 - -
Arst5g04436 811 Pfam ATPase family associated with various cellular activities (AAA) 540 670 IPR003959 GO:0005524|GO:0016887
Arst5g04436 811 MobiDBLite consensus disorder prediction 730 756 - -
Arst5g04436 811 Pfam AAA+ lid domain 692 736 IPR041569 -
Arst5g04436 811 Gene3D - 499 671 IPR027417 -
Arst5g04436 811 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 51 810 - -
Arst5g04436 811 MobiDBLite consensus disorder prediction 424 439 - -
Arst5g04436 811 Gene3D - 672 747 - -
Arst5g04436 811 MobiDBLite consensus disorder prediction 424 481 - -
Arst5g04436 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 727 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04436 Arst-Chr5 105647277 105652619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04436 456 729 Calmodulin-binding Proteins AT3G56690 38.516 2.88e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04436 - - gmx:100817952 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04436 5 105647277 105652619 Arst9g03063 9 108056818 108061695 PCT