Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04404 GTATCCGCCCCTAACTCCGCGGAGGACGCCGCAAAGAAAATCCGAAAGCCATACACTATCACTAAGTCCAGGGAGAATTGGACTGAACCCGAACACGACAAGTTCCTCGAAGCTCTTCAACTGTTTGATCGTGACTGGAAAAAGATTGGAGCATTTGTTGGATCAAAGACAGTTATACAGATTCGTAGTCATGCACAGAAATACTTCATAAAAGTTCAGAAGAGTGGGACAAGTGAGCATCTTCCTCCACCCAGGCCGAAAAGAAAAGCTGCCCATCCTTATCCTCAAAAGGCTTCCAAAAATGCTCCTTTACTCTCACAGCTATCAGAATCTTTTCAATCTTCATCTGCTTTACTTGAGTCCGGATATGTCCTGAAACATGACCCCTCCACAATGCTTAAAACTCCTATTATGAACACTGTGGTGCCTTCATGGTCAAACTCCACCTTGCAAACCACTAATTTACTGCATGTACCAAAAGTGAACGACCCTTCCGGTAGCAGTGAGAGTACCCCCAGAGTGCAGCCAGGTGATGAATCCAATGGACAGGGGAATAGTAGCTTTCCACTAAGAGTGCTTCCCGATTTCACTCAAGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATACAACTGATCATTTGCACAAACTGAAAAACATGGACCGTATAGATGTTGAGACGGTCCTGTTGTTGATGAGAAATCTCTCTGTCAATTTAACTAGCCCAGATTTTGAGGACCATAGGAAGGTTCTTTCAACATACGAGGTTGAACTTGATACAGATGACTACATCAATGCAGATATACTTCAGGATGATCAGTTGAAGAGTGCTGCTACCTAG 843 0.4365 MVSKNPNPPEGFYLDPTGAALPGLAPFASVTAAATAVSAPNSAEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIGAFVGSKTVIQIRSHAQKYFIKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPLLSQLSESFQSSSALLESGYVLKHDPSTMLKTPIMNTVVPSWSNSTLQTTNLLHVPKVNDPSGSSESTPRVQPGDESNGQGNSSFPLRVLPDFTQVYSFIGSVFDPNTTDHLHKLKNMDRIDVETVLLLMRNLSVNLTSPDFEDHRKVLSTYEVELDTDDYINADILQDDQLKSAAT 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04404 316 NCBIfam myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Arst5g04404 316 PANTHER SWI/SNF COMPLEX-RELATED 35 277 - -
Arst5g04404 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Arst5g04404 316 FunFam protein REVEILLE 6 isoform X1 62 110 - -
Arst5g04404 316 ProSiteProfiles SANT domain profile. 58 109 IPR017884 -
Arst5g04404 316 Pfam Myb-like DNA-binding domain 60 105 IPR001005 -
Arst5g04404 316 MobiDBLite consensus disorder prediction 194 224 - -
Arst5g04404 316 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Arst5g04404 316 SUPERFAMILY Homeodomain-like 54 110 IPR009057 -
Arst5g04404 316 CDD SANT 62 105 IPR001005 -
Arst5g04404 316 MobiDBLite consensus disorder prediction 110 135 - -
Arst5g04404 316 Gene3D - 62 110 - -
Arst5g04404 316 SMART sant 59 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04404 Arst-Chr5 105432751 105436298 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst5g04404 Myb_DNA-binding 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04404 - - gmx:100783949 449.514