Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04400 ATGAAACTGCAGAATCTCTCATCATTGCTATCAACACCAATATTCTTTGGAATACCATTATGGGTTTTGCTTGTATCTTCCATTGCAGCATTCATTCTTACAGTATGTATAATCATATGCATCTGCTGCATACACTATCATCCTCGTCGAGAGGAATCCTACAAAGCACGTTTCTCTTTATCCAAATCAGATGTCTGCAGGCGCCTCAGTAGTGTTCTTCATAGATCTTCATCCCTTGACAAATATAGATCATTGTTGCTTTCATCAGCATCATGCAACTTTTCAGAACTTGAGAAGAACTCTGAGTATTTATCAAGTGAAGATGATCTTGATGATCATGATGGTGCTGAGTTACTCCAATCTGACTCACCAGAGTTCAAAGGAGTTATGTGTCAGCACTTTCAGGTAGAGGAGTTAGAGGATGCTACAAATGGATTTGCTGAAAGAAATGTGATTGAAAGTGGGGACAATGGAACAGTTTATAGAGGTCTGTTAGCTAATAATATGAAGGTGGTTGTGAAGAAGCTACCTTGTCACAGTTGCCAACCTGAGGAGTCTTTTGCTTCACAAGTGGAGTTAACTGCAAGTGCCAAGCACAAGAGACTTGTGAAATTGATAGGATACTCTACTAATAGAACTTGCAGGCTGTTAGTATCTGAATATATAGATAATGGAAATCTGCATAAATGGCTTCATGAATTTCAAGGATCACTGAGCCCTCTAACATGGCCTATCAGATTGCACATTCTACAAGCTGTTGCACATGGAATTGCATACCTTCATGAGGAAGTTGAACCAAAGATTATCCATGGCAGCATAAAATCTAGGAATATATTACTTGACCAACAATGGAATCCTAAGATCTCTGATTTTGGCCTTTTTAAGCTTCAAAGTTCTAACTCTAGTCACTCTATGAGTAACTTCACTGAGAGTAATGACATTTATGATTTCGGAATACTTATAATGGAGACTATATCAGGAAGGATTCCATTTCCATCACATCACAGTCAACCACAGGTAAACAATATTGGATTCATGAGCGATTGGTTTTGA 1053 0.3827 MKLQNLSSLLSTPIFFGIPLWVLLVSSIAAFILTVCIIICICCIHYHPRREESYKARFSLSKSDVCRRLSSVLHRSSSLDKYRSLLLSSASCNFSELEKNSEYLSSEDDLDDHDGAELLQSDSPEFKGVMCQHFQVEELEDATNGFAERNVIESGDNGTVYRGLLANNMKVVVKKLPCHSCQPEESFASQVELTASAKHKRLVKLIGYSTNRTCRLLVSEYIDNGNLHKWLHEFQGSLSPLTWPIRLHILQAVAHGIAYLHEEVEPKIIHGSIKSRNILLDQQWNPKISDFGLFKLQSSNSSHSMSNFTESNDIYDFGILIMETISGRIPFPSHHSQPQVNNIGFMSDWF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04400 350 Gene3D Phosphorylase Kinase; domain 1 117 221 - -
Arst5g04400 350 FunFam Os07g0541700 protein 223 310 - -
Arst5g04400 350 Gene3D Transferase(Phosphotransferase) domain 1 222 349 - -
Arst5g04400 350 PANTHER OS01G0323000 PROTEIN 9 346 - -
Arst5g04400 350 SUPERFAMILY Protein kinase-like (PK-like) 127 343 IPR011009 -
Arst5g04400 350 ProSiteProfiles Protein kinase domain profile. 146 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04400 350 Pfam Protein tyrosine and serine/threonine kinase 150 337 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04400 Arst-Chr5 105407505 105409072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04400 132 330 Receptor kinase-like Gene Family AT3G58690 36.818 1.74e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Arst5g04400 PK_Tyr_Ser-Thr 2.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04400 - - adu:107490846 678.707