LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g04392	ATGGAAACTCAAAAGCTTGTTATCATTATTATCATACCTTTCATTCTTCTTCTTTTCATGATCCCATTCTCTTCTTCTTTTACTCCTATAGACAACTACCTCCTAAGCTGTGGGTCACAGAACAATGCTTCATTCTTCAACAGGATTTTCATTGGTGATGATGGTACCAACCAAGGCTCAAACTTTCTCTCTTCTGGCAAATCCTTTTCTCTCAGAAACCAAAACCCAAATCCAAAGTTGCCATCTTTGTATCACACTGCAAGAGTTTTCACCAACAATGGTGGCTACAGGTTCAGCATGAGGAAAAACGGCACTCACTTGGAAGCAGCTAAGGCTGCAGTTACCACTCACACCCCCAATTATCAGAAGGGAGGTGCAACCCGAGAGATTGCACCGGATAATGTTTATATGACTGCTCAGGAGATGAATATGAATCAGTCCACCTTAGCTTCACAGTTCAACATAACATGGAATTTTCCGGTGGCTTCCGGTGGCGTTCGACACTTGATTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCTCTTAATTTGCTTTACTTTGATGTGTATATAAACAACTACTCTGCATATAAGGATGTTGATCTGTCATCCCTTACATTCCACGCACTTGCATCTCCAGTCTATGTGGATTTCATTGCAGATTCTGATGATTCGGGTGTTATTCAGATAAGTGTTGGTCCTTCTGATCTTAGCAGTTCAATGAGGAAGAATGCCATACTGAATGGAGCAGAGATATTGAAGATGGTTAATGTCATGGATTCGCATGTTTCGCCGAGGAAGAAGAGGATTTGGGTTTTGGTAGGCTCAATTGTTGGAGGGACTATTGTTTTGGTTCTAGTTGTAGCTGCTATTTTGCTTATTGTCAAATGCAAGAGGAAGAAACCAAGAGAAAGATCAGTAGAAAGTGTAGTGTGGACTCCGTTGCGCATGTTTGGAGGGAGTTCACAAAGTAGAATGTCTGAAGCTGTAGCTTTTCCATCTCCTGGTTCTTATGGATATCTTGGTTTGAAGATCCCTTTTGCTGAGATTCAATTAGCAACAAACAATTTCGATAGAACTTTGATTATAGGGTCTGGAGGTTTTGGCATGGTTTATAAAGGAGTTCTCAGGGACAATTTAAAGGTTGCTGTCAAGAGAGGAATGCCAGGATCAAGGCAGGGCCTTCCGGAATTCCAGACTGAAATCACTATTTTGTCCAAGATTCGCCATCGCCATCTTGTTTCGCTGGTTGGATACTGTGAAGAACATTCAGAAATGATTCTTGTTTATGAGTATGTGGAGAAAGGACCACTTAAGAAGCATCTGTATGGCTCTTCAGCACATCCACCTTTGTCCTGGAAGCAGCGACTCGAGATATGCATTGGCGCGGCTAGAGGTCTGCATTATCTTCACACTGGTTTCGCGCAAGGAATCATTCACCGGGACATCAAATCAACCAATATCTTGCTTGATGAGAATTATGTGGCCAAGGTTGCTGATTTTGGTCTATCAAGATCAGGGCCATGTATCAATGAAACTCATGTGAGTACTAATGTCAAGGGTAGTTTTGGTTATCTTGATCCAGAGTATTTCCGGAGGCAGCAACTCACGGATAAGTCAGATGTGTACTCATTCGGCGTTGTGCTTTTCGAGGTGCTGTGTGCTAGACCTGCTGTTGATCCACAACTTGATAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGTCAGAAGAAGGGAATGCTTGAACAAATCATTGATCCATGTCTTGTTGGACAAATCAAGGAGAGTTCATTGAAGAAATTCGGGGAAACAGCAGAGAAATGTTTGGCTGAGTATGGTGTTGATAGGCCAAGCATGGGTGATGTGTTGTGGAATTTGGAGTACTTGCTTCAGCTCCAAGAAAATGGACAACAAGGTGAACCGGATAAGGCGACTGCGACGATTGTTCCCGGGAATGCTTCTAGCAGCACAAGAACTGAAGATGATTCTGATAAAGGCTATTCTGACATAAGTTCTAGCCAGGTTTTTTCTCAACTAATGACCAATGAAGGCAGATAG	2064	0.4244	METQKLVIIIIIPFILLLFMIPFSSSFTPIDNYLLSCGSQNNASFFNRIFIGDDGTNQGSNFLSSGKSFSLRNQNPNPKLPSLYHTARVFTNNGGYRFSMRKNGTHLEAAKAAVTTHTPNYQKGGATREIAPDNVYMTAQEMNMNQSTLASQFNITWNFPVASGGVRHLIRLHFCDIVSPALNLLYFDVYINNYSAYKDVDLSSLTFHALASPVYVDFIADSDDSGVIQISVGPSDLSSSMRKNAILNGAEILKMVNVMDSHVSPRKKRIWVLVGSIVGGTIVLVLVVAAILLIVKCKRKKPRERSVESVVWTPLRMFGGSSQSRMSEAVAFPSPGSYGYLGLKIPFAEIQLATNNFDRTLIIGSGGFGMVYKGVLRDNLKVAVKRGMPGSRQGLPEFQTEITILSKIRHRHLVSLVGYCEEHSEMILVYEYVEKGPLKKHLYGSSAHPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLDREQVNLAEWALECQKKGMLEQIIDPCLVGQIKESSLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYLLQLQENGQQGEPDKATATIVPGNASSSTRTEDDSDKGYSDISSSQVFSQLMTNEGR	687

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g04392	687	MobiDBLite	consensus disorder prediction	670	687	-	-
	Arst5g04392	687	Pfam	Protein tyrosine and serine/threonine kinase	362	621	IPR001245	GO:0004672\|GO:0006468
	Arst5g04392	687	FunFam	Receptor-like protein kinase FERONIA	433	647	-	-
	Arst5g04392	687	MobiDBLite	consensus disorder prediction	637	687	-	-
	Arst5g04392	687	SUPERFAMILY	Protein kinase-like (PK-like)	342	626	IPR011009	-
	Arst5g04392	687	PANTHER	OS07G0166700 PROTEIN	344	635	IPR045272	GO:0004714\|GO:0006468
	Arst5g04392	687	Gene3D	-	108	256	-	-
	Arst5g04392	687	Gene3D	-	32	107	-	-
	Arst5g04392	687	Gene3D	Transferase(Phosphotransferase) domain 1	433	653	-	-
	Arst5g04392	687	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	478	490	IPR008271	GO:0004672\|GO:0006468
	Arst5g04392	687	Gene3D	Phosphorylase Kinase; domain 1	324	432	-	-
	Arst5g04392	687	CDD	STKc_IRAK	363	629	-	-
	Arst5g04392	687	ProSiteProfiles	Protein kinase domain profile.	357	631	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g04392	687	ProSitePatterns	Protein kinases ATP-binding region signature.	363	385	IPR017441	GO:0005524
	Arst5g04392	687	FunFam	receptor-like protein kinase FERONIA	321	432	-	-
	Arst5g04392	687	Pfam	Malectin-like domain	120	254	IPR024788	-
	Arst5g04392	687	MobiDBLite	consensus disorder prediction	637	659	-	-
	Arst5g04392	687	SMART	serkin_6	357	631	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g04392	Arst-Chr5	105331303	105334192	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst5g04392	110	687	Receptor kinase-like Gene Family	AT3G46290	52.554	0.0	589

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Arst5g04392		PK_Tyr_Ser-Thr	1.9e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g04392	-		-	gmx:100814974	934.865