Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04345 ATGTCATCGCCGGGCTTCACCGGCGGCGGGGCATCAGATTTCTTCACCGGAGCAGCCCGATCCAGCACCATGAACACGAACCCCGGCGCCTCCGCCGTGGCAGCCAACAACCACCGGCACCTCCACCCTTCCCACCCCCTGTACCGAACCCAACAGCAGCTGCCCGCACTGTTTCTAGATCCTTCCTCACAGATCACGCCTCGGCACCAAACACCAACAACACAACCACCACCAACAACCCTCATCGGTAAACGCACCCTCGCCGAATTTCAAACCCAACAACAACATAACCACCTCCTTAACAACCACAACCACAACAGCAATAACAACCATGTCCTCTCTAACCTCCTACTCCGCTCCGTTAAGCCAAGGACGGCGTCGTTTCACACAGGTTCCCCTTTGTCCCCTTTATCGCCCATAGACTTCTCAATCCCTGAATTGCAAATCCCTTCCTCAACTCATGCCTTCCAAACGCAGCGTTTTGGCATGCCTCTCTTCAACCAGCTTCGCCCTAACCCCATTCACTCCAACAGCCTCCCCTTGCCTCCTCCTAACTCCAATAATCATTTCCCCTACCGATGCTCCAATTTGAGTGGTTCCGTTTCCAACCGGGTCCAGCTCCCGCTCCCGGCCGAACCGGAGAACAAGATTAATACGATGGACCACAGGCTTCTGGAATTGGAGAAGCAGCTTCTAGAAGACGAAGAAGAAGAAGCTGAAGCCGATGCGGCTTCTGTGATCACAACAAGCGCGTGGTCAGAGACCATTCAGAATCTCATGGGAAACGGGTCCACACCCAAACCAGCTTCTTCGTCCCCTACATCCTCAACAACATCTTCAACTTCGTCTTCTTCCTCCGTGGCTTCTCCTGCCATAGGGTGCTGGAAGCAGACGCTAATGGAGGCCGCATCTGCCATAGCCGAAGGTAAACAAGATTCTGCCACTGAGATCCTGGCCAGGTTGAGTCAAGTTTCCAACCCGAATGGAAATTCGGATCAAAGGTTGATGGATTGCATGGTTTCGGCGCTCAAATCGAGGGTAAACCCGCTGGAGAATCCTCCTCCCGTGGCCGAGTTGTTCAGCAACGAACACGCCGAGTCGACTCAGTTGATGTTTGAAAACTCGCTCTGTTTCATGGTAGGGTTCATGGCAGCCAACTTCGCAATCCTCGAAGCTGCATTTGAGAACAAAACGGAGCTGAAGAGGTTCTGCGTGGTTGATTTCGATATAGGCCACGGGAAACAGTACGTGAGCCTTCTACTCGCGCTCTCCGCGCGTGGGAGAACCCCACCGGCTATGGTAAGGATCGTGGCGGTGGCGGACACCGGCGGCCAAGAAGAGAGATTAAAATCTGTGGGCGAAATGCTAGCAAGACAGGCAGAGAGGTTTAGGATCGGATTCGAGTTCAAAATCGTTCAGGTCACTCAGCGATTCTCCGAGTTGACCCGCGAGTCGCTTGGATGCGACGCGGATGAGTTTCTAGCTGTGAACTTCGCTTTCAAATTGAACCGAATCCCGGACGAGAGCGTGTCCACGGAGAATCCACGCGACGAGCTCTTGAGGCGCGTGAAGTCACTCTCGCCGCGCGTGGTTACAATCATCGAACAGGAAATAAACGCCAACACGGCGCCGTTTCTGGCGCGCGTGGCCGATTCGTGTTCGTATTACGGCGCGCTCTTCGACTCAGTCGAGTCCTCACTCGGCAAGGACAACAATAGTAACTCCGAGCGAGTCAAGGTGGAGGAAGGACTGAGTCGAAGGGTTTGCAACTCGTTGGCGTGTGAAGGCAGAGACCGCGTGGAGCGTTACGAAGTTTTCGGAAAATGGCGGGCACGCATGGGAATGGCGGGGTTCAAGTCGAAGCCACTGAGTCAGAACGTGGCCGAGTCGATCAAGTCACGACTCGCCCAGAGCAACAATTGTAACAGCCGAGTCAACTCGGGCCTCACCGTTAAAGAAGAGAACGGTGGGATTTGCTTTGGATGGATGGGGAAAACTCTCACCGTCGCTTCTGCTTGGCTCTAA 2025 0.5432 MSSPGFTGGGASDFFTGAARSSTMNTNPGASAVAANNHRHLHPSHPLYRTQQQLPALFLDPSSQITPRHQTPTTQPPPTTLIGKRTLAEFQTQQQHNHLLNNHNHNSNNNHVLSNLLLRSVKPRTASFHTGSPLSPLSPIDFSIPELQIPSSTHAFQTQRFGMPLFNQLRPNPIHSNSLPLPPPNSNNHFPYRCSNLSGSVSNRVQLPLPAEPENKINTMDHRLLELEKQLLEDEEEEAEADAASVITTSAWSETIQNLMGNGSTPKPASSSPTSSTTSSTSSSSSVASPAIGCWKQTLMEAASAIAEGKQDSATEILARLSQVSNPNGNSDQRLMDCMVSALKSRVNPLENPPPVAELFSNEHAESTQLMFENSLCFMVGFMAANFAILEAAFENKTELKRFCVVDFDIGHGKQYVSLLLALSARGRTPPAMVRIVAVADTGGQEERLKSVGEMLARQAERFRIGFEFKIVQVTQRFSELTRESLGCDADEFLAVNFAFKLNRIPDESVSTENPRDELLRRVKSLSPRVVTIIEQEINANTAPFLARVADSCSYYGALFDSVESSLGKDNNSNSERVKVEEGLSRRVCNSLACEGRDRVERYEVFGKWRARMGMAGFKSKPLSQNVAESIKSRLAQSNNCNSRVNSGLTVKEENGGICFGWMGKTLTVASAWL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04345 674 Pfam GRAS domain family 296 673 IPR005202 -
Arst5g04345 674 Coils Coil 217 244 - -
Arst5g04345 674 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 264 662 IPR005202 -
Arst5g04345 674 ProSiteProfiles GRAS family profile. 286 674 IPR005202 -
Arst5g04345 674 MobiDBLite consensus disorder prediction 258 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04345 Arst-Chr5 105250563 105253094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04345 44 673 GRAS Transcription Factor Family AT5G52510 45.942 5.47e-152 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst5g04345 GRAS 2.7e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04345 - - gmx:100808172 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04345 5 105250563 105253094 Arst5g04345 5 105250563 105253094 ECH