Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04332 ATGGCAGCAGAGTCTCTGAATCTGAAGATGACAGGTAAGAGCCATGTGAAGGCAAAGAAGAACATTGGAAGAAAAGAGTATCAACTTGTGACCTTTGATCTTCCATACTTAGCATTTTACTACAACCAGAAGCTGCTGTTTTATAAAGGGAATGACTTTGAAGGAATGGTGGAGAAGGTGAAAGAGGGTCTAAGTGTGGTTCTTGAGGAGTTTCATCAGCTAGCAGGGAAGATAGGAAAAGATGAAGAAGGAGTGTTCAGAGTGGAATATGATGATGAAATGGAAGGTGTTGAAGTAACTGAGGCTGTTGCTGAGGATGTTGGTGTTGAAGATCTTGCTGTTTCTGAGAGTAGCAGTTCCTTGATGGAACTTGTTCCTTACAATGGTATCTTGAATTTAGAAGGCATGCATAGGCCTTTGCTTGCAATTCAGCTGACCAAACTGAAAGATGGGCTTGCAATGGGCTGTGCCTTCAACCATGCAGTCCTTGATGGGACTTCCACGTGGCAATTCATGAGTTCATGGGCCGAGATCTGCAGCGGCGCACCGTCAACAGTAGCCCCACCCTTCCTTGACCGGACCAAGGCCCGAAACACCCGGGTGAAGCTTGACCTCTCATTGCCTGAGCCCAACGGGCCGACATCCGATAAAGAGGAAAAGCCCAAGCCCAAGCCCAAATTAAGAGAAAAGATCTTCAAATTTTCCGAGTCTGCCATCGACAAGATCAAGTCAACGGTCAACGAAAACCCACCATCGGACGGCTCAAAGGCATTCTCAACATTCCAAGCTCTCTCGGCCCATGTTTGGCGCCACATAACCCTGGCCCGTAACCTAAAGCCCGAAGACTACACAGTCTTTACCGTATTCGTAGATTGTAGAAAACGGATCGACCCACCAATGCCAGAGGCCTATTTTGGAAACCTTATCCAAGCCATATTCACGGTGACAGCAGGTGGGCTTCTGTTGGCCCATCCACCACAATTTGGAGCATCATTGATCCAAAAAGCAATTGAAGCCCACAATGGTAAGGCAATTGATGAGAGAAACAAAGAGTGGGAGAGTGCACCAAAAATTTTTGAATTCAAGGATGCTGGAGTGAATTGTGTGGCTGTGGGAAGCTCTCCTAGGTTTAAAGTTTATGACATTGATTTTGGTTGGGAGAAGCCTGAAAATGTGAGGAGTGGAACCAATAACAAGTTTGATGGTATGATTTATTTGTATCCCGGCAAGAGTGGTGGTAGGAGCATTGATGTTGAGTTGACTTTGGACCCTCATGCTATGGAGATTTTGGAGAAAGACAAAGACTTCCTTCTTGAGGTTTAA 1323 0.458 MAAESLNLKMTGKSHVKAKKNIGRKEYQLVTFDLPYLAFYYNQKLLFYKGNDFEGMVEKVKEGLSVVLEEFHQLAGKIGKDEEGVFRVEYDDEMEGVEVTEAVAEDVGVEDLAVSESSSSLMELVPYNGILNLEGMHRPLLAIQLTKLKDGLAMGCAFNHAVLDGTSTWQFMSSWAEICSGAPSTVAPPFLDRTKARNTRVKLDLSLPEPNGPTSDKEEKPKPKPKLREKIFKFSESAIDKIKSTVNENPPSDGSKAFSTFQALSAHVWRHITLARNLKPEDYTVFTVFVDCRKRIDPPMPEAYFGNLIQAIFTVTAGGLLLAHPPQFGASLIQKAIEAHNGKAIDERNKEWESAPKIFEFKDAGVNCVAVGSSPRFKVYDIDFGWEKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLDPHAMEILEKDKDFLLEV 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04332 440 MobiDBLite consensus disorder prediction 202 227 - -
Arst5g04332 440 Pfam Transferase family 8 436 - -
Arst5g04332 440 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 11 437 - -
Arst5g04332 440 Gene3D - 5 205 IPR023213 -
Arst5g04332 440 MobiDBLite consensus disorder prediction 213 227 - -
Arst5g04332 440 Gene3D - 209 433 IPR023213 -
Arst5g04332 440 FunFam Tryptamine hydroxycinnamoyl transferase 213 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04332 Arst-Chr5 105124822 105127874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04332 40 440 Monolignol Biosynthesis Gene Families AT5G48930 26.824 1.34e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04332 K19747 - gmx:100790669 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04332 5 105124822 105127874 Arst5g04332 5 105124822 105127874 ECH