Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04324 ATGGCAGTTTCTGCAAAAGAAAAAGCAAAAGCAAAAGCGAAGGGCTATGATGGGAGTATGGAAGTGGTGAAAACGGAAGATAGAATAGATACAATAATCAGACAAGCGATTGGCAGGGAACCTTTTTTCACTTTTCCAAGGGCCACTGACACCCCTGTTCAGTGGATTCAGTTACTTCATGCCTTGGATCAGCAGGGTGTTAGCAATTCTTTTCCAGAACTTCCAGGGTGGCCATTGCTCTATCCTGTAAAGGTTCAGTTGCAGAAGTGTGACAAATGTTCTCGAGAGTTTTGCTCCACCATTAATTATAGAAGACATATACGTGCACACCATCGATTGAAAAAGCTTGATAAGGATTCTACAAAAAATAGGGACCTTTTAGGAGCATATTGGGATAAGCTCTCTATAGAAGAGGCAAAGGAAGTTGTATCGTTTGAGAATGTGATGCTGGAGGAAGTTCCAGCATCTTCAATTTTAGAAGCTCTGACAACCCTTCTACAAAAGCCAGGATTTTCTTCATTACCACAGTATTATCTGAGGGCTGGTGCTGCCCTTTTGGATATTGTTCACTCTCAGTCTTCCTGCTTTCCCTTATCTTCCCAGGAGTTGTTCACTATCCTTGATGATGCTAGTGAAAAAACATGTTTATGTGGGACTGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAAATTGGTCTTGAACCAAGAAATTTAGTTGCTTGCACATGTTTCTTGCTAGAACAGAAGTTGGTGAAGGCATGGCTTGCTGACAAGGATGCTGAAGCCTTGAGGTGCCACAGGCAGCTGGTGGAGGAGGAAGAAGCTGCTCAAAAAAGACAAGCTGAGATATTGGAGAGGAGACGCCAGAAGAAGCTTAGACAAAAAGACCAGAAGGCAAGGGAACAAAGGCATGAGGCAGAAATTGAAGAGCACATTGGGAGCGCAGAAGATGATTTATCAGCAGCAGAAGCATCTTTGGCTACTATTGATTCTGAAGCACATAATCTGGAAACATTCATAGATAGCGCTCCTTCATATGATCCTTTTCAATGCTCTGACACAAATGTAGGACTAGATGGCGTTCAATCGAGTTACAATCTTGGCAGTGATCAGTATATTGAGAGACGGTCGGCACGTCGACCCAATCGTAGGCTCACAGCAGTTTCCAGACAGAAGGGTCTGCAAAAATCACAATGGGCTGTAGCGAATGATTCTCATACAAGCCAGAACTCAACACTTTCAAAGATTGAAGTCATTCAAAAATATGGAACCCATCGTGATCATAGGGTAGCTAATGGTAGTAGAGTTTGGAGTCCAAAGTCAAAACCAGGAATTGATAGGATGGTTCCAGAAGCTAGAGTAGAGAAAGAACCAGACCTAGATAAGGATCATGAAGTTTTGATAGGATCTATATCAATTACTCTAGGGAATTGCAGCCAATCAGAGCGTAATGCAGTGGCATCTCGAGCAGACTGCAATGTTGACAATCTGGCCAACCAGAATAGTTCTCAGAATAAGCCATTGAATCCTGATTTTGTCCAGAATGGCAACAATATGGCCACTAAGCTTTGGAGACCAGTTAGCTGGCACGAAACTAAAAATCCACTTCCAGTTCAAAGTGGTGAGACAGAAGTGAATACAATTCATGAAAATGGAGATTGTCAGAACCAGTCAGATCCAAGTTGTTTAAGGTCGTGCAGTACAGATGGTAGTGATGTCGGTTTCGAGATTAATGTTTCCAATACAGAGGGGATAATGGATCCAGGAAGCTTACAGTTATTATCCAGCCATGCCGCAAAAATTTTTCTCGAACAAAGATGGAAAGAAGCTATGTCATCAAATCATCTGCTTTTGATTGTTTCCGACTATGAACCTCCTGGATGCCAGGAAATACAGGATTCTAGAATGGCAGTATGTCAATCTTCTGAGGTTACAGTGAAGCGGTTAGCTGCAGCCCCGAAGGTTGCTAAATCCAATCACAGAATGAAGCCTGAAAAGGGAACCAAGATAAAATATATTCCCAAACAAAAGACAGCTGCCTAA 2055 0.4229 MAVSAKEKAKAKAKGYDGSMEVVKTEDRIDTIIRQAIGREPFFTFPRATDTPVQWIQLLHALDQQGVSNSFPELPGWPLLYPVKVQLQKCDKCSREFCSTINYRRHIRAHHRLKKLDKDSTKNRDLLGAYWDKLSIEEAKEVVSFENVMLEEVPASSILEALTTLLQKPGFSSLPQYYLRAGAALLDIVHSQSSCFPLSSQELFTILDDASEKTCLCGTAVSMQRYIFDGEAGKIGLEPRNLVACTCFLLEQKLVKAWLADKDAEALRCHRQLVEEEEAAQKRQAEILERRRQKKLRQKDQKAREQRHEAEIEEHIGSAEDDLSAAEASLATIDSEAHNLETFIDSAPSYDPFQCSDTNVGLDGVQSSYNLGSDQYIERRSARRPNRRLTAVSRQKGLQKSQWAVANDSHTSQNSTLSKIEVIQKYGTHRDHRVANGSRVWSPKSKPGIDRMVPEARVEKEPDLDKDHEVLIGSISITLGNCSQSERNAVASRADCNVDNLANQNSSQNKPLNPDFVQNGNNMATKLWRPVSWHETKNPLPVQSGETEVNTIHENGDCQNQSDPSCLRSCSTDGSDVGFEINVSNTEGIMDPGSLQLLSSHAAKIFLEQRWKEAMSSNHLLLIVSDYEPPGCQEIQDSRMAVCQSSEVTVKRLAAAPKVAKSNHRMKPEKGTKIKYIPKQKTAA 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04324 684 MobiDBLite consensus disorder prediction 662 676 - -
Arst5g04324 684 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Arst5g04324 684 Coils Coil 271 313 - -
Arst5g04324 684 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 8 683 - -
Arst5g04324 684 MobiDBLite consensus disorder prediction 656 684 - -
Arst5g04324 684 ProSitePatterns Zinc finger C2H2 type domain signature. 90 111 IPR013087 -
Arst5g04324 684 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04324 Arst-Chr5 105062745 105068142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04324 20 681 C2H2 Transcription Factor Family AT4G25610 40.648 2.99e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst5g04324 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04324 - - aip:107644858 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04324 5 105062745 105068142 Arst5g04324 5 105062745 105068142 ECH
Arst5g04324 5 105062745 105068142 Arst9g03105 9 108633431 108639117 PCT