Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04323 ATGGCAGTTTCTGCAAAAGAAAAAGCAAAAGCAAAAGCGAAGGGCTATGATGGGAGTATGGAAGTGGTGAAAACGGAAGATAGAATAGATACAATAATCAGACAAGCGATTGGCAGGGAACCTTTTTTCACTTTTCCAAGGGCCACTGACACCCCTGTTCAGTGGATTCAGTTACTTCATGCCTTGGATCAGCAGGGTGTTAGCAATTCTTTTCCAGAACTTCCAGGGTGGCCATTGCTCTATCCTGTAAAGGTTCAGTTGCAGAAGTGTGACAAATGTTCTCGAGAGTTTTGCTCCACCATTAATTATAGAAGACATATACGTGCACACCATCGATTGAAAAAGCTTGATAAGGATTCTACAAAAAATAGGGACCTTTTAGGAGCATATTGGGATAAGCTCTCTATAGAAGAGGCAAAGGAAGTTGTATCGTTTGAGAATGTGATGCTGGAGGAAGTTCCAGCATCTTCAATTTTAGAAGCTCTGACAACCCTTCTACAAAAGCCAGGATTTTCTTCATTACCACAGTATTATCTGAGGGCTGGTGCTGCCCTTTTGGATATTGTTCACTCTCAGTCTTCCTGCTTTCCCTTATCTTCCCAGGAGTTGTTCACTATCCTTGATGATGCTAGTGAAAAAACATGTTTATGTGGGACTGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAAATTGGTCTTGAACCAAGAAATTTAGTTGCTTGCACATGTTTCTTGCTAGAACAGAAGTTGGTGAAGGCATGGCTTGCTGACAAGGATGCTGAAGCCTTGAGGTGCCACAGGCAGCTGGTGGAGGAGGAAGAAGCTGCTCAAAAAAGACAAGCTGAGATATTGGAGAGGAGACGCCAGAAGAAGCTTAGACAAAAAGACCAGAAGGCAAGGGAACAAAGGCATGAGGCAGAAATTGAAGAGCACATTGGGAGCGCAGAAGATGATTTATCAGCAGCAGAAGCATCTTTGGCTACTATTGATTCTGAAGCACATAATCTGGAAACATTCATAGATAGCGCTCCTTCATATGATCCTTTTCAATGCTCTGACACAAATGTAGGACTAGATGGCGTTCAATCGAGTTACAATCTTGGCAGTGATCAGTATATTGAGAGACGGTCGGCACGTCGACCCAATCGTAGGCTCACAGCAGTTTCCAGACAGAAGGGTCTGCAAAAATCACAATGGGCTGTAGCGAATGATTCTCATACAAGCCAGAACTCAACACTTTCAAAGATTGAAGTCATTCAAAAATATGGAACCCATCGTGATCATAGGGTAGCTAATGGTAGTAGAGTTTGGAGTCCAAAGTCAAAACCAGGAATTGATAGGATGGTTCCAGAAGCTAGAGTAGAGAAAGAACCAGACCTAGATAAGGATCATGAAGTTTTGATAGGATCTATATCAATTACTCTAGGGAATTGCAGCCAATCAGAGCGTAATGCAGTGGCATCTCGAGCAGACTGCAATGTTGACAATCTGGCCAACCAGAATAGTTCTCAGAATAAGCCATTGAATCCTGATTTTGTCCAGAATGGCAACAATATGGCCACTAAGCTTTGGAGACCAGTTAGCTGGCACGAAACTAAAAATCCACTTCCAGTTCAAAGTGGTGAGACAGAAGTGAATACAATTCATGAAAATGGAGATTGTCAGAACCAGTCAGATCCAAGTTGTTTAAGGTCGTGCAGTACAGATGGTAGTGATGTCGGTTTCGAGATTAATGTTTCCAATACAGAGGGGATAATGGATCCAGGAAGCTTACAGTTATTATCCAGCCATGCCGCAAAAATTTTTCTCGAACAAAGATGGAAAGAAGCTATGTCATCAAATCATCTGCTTTTGATTGTTTCCGACTATGAACCTCCTGGATGCCAGGAAATACAGGATTCTAGAATGGCAGTATGTCAATCTTCTGAGGTTACAGTGAAGCGGTTAGCTGCAGCCCCGAAGGTTGCTAAATCCAATCACAGAATGAAGCCTGAAAAGGGAACCAAGATAAAATATATTCCCAAACAAAAGACAGCTGCCTAA 2055 0.4229 MAVSAKEKAKAKAKGYDGSMEVVKTEDRIDTIIRQAIGREPFFTFPRATDTPVQWIQLLHALDQQGVSNSFPELPGWPLLYPVKVQLQKCDKCSREFCSTINYRRHIRAHHRLKKLDKDSTKNRDLLGAYWDKLSIEEAKEVVSFENVMLEEVPASSILEALTTLLQKPGFSSLPQYYLRAGAALLDIVHSQSSCFPLSSQELFTILDDASEKTCLCGTAVSMQRYIFDGEAGKIGLEPRNLVACTCFLLEQKLVKAWLADKDAEALRCHRQLVEEEEAAQKRQAEILERRRQKKLRQKDQKAREQRHEAEIEEHIGSAEDDLSAAEASLATIDSEAHNLETFIDSAPSYDPFQCSDTNVGLDGVQSSYNLGSDQYIERRSARRPNRRLTAVSRQKGLQKSQWAVANDSHTSQNSTLSKIEVIQKYGTHRDHRVANGSRVWSPKSKPGIDRMVPEARVEKEPDLDKDHEVLIGSISITLGNCSQSERNAVASRADCNVDNLANQNSSQNKPLNPDFVQNGNNMATKLWRPVSWHETKNPLPVQSGETEVNTIHENGDCQNQSDPSCLRSCSTDGSDVGFEINVSNTEGIMDPGSLQLLSSHAAKIFLEQRWKEAMSSNHLLLIVSDYEPPGCQEIQDSRMAVCQSSEVTVKRLAAAPKVAKSNHRMKPEKGTKIKYIPKQKTAA 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04323 684 MobiDBLite consensus disorder prediction 662 676 - -
Arst5g04323 684 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Arst5g04323 684 Coils Coil 271 313 - -
Arst5g04323 684 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 8 683 - -
Arst5g04323 684 MobiDBLite consensus disorder prediction 656 684 - -
Arst5g04323 684 ProSitePatterns Zinc finger C2H2 type domain signature. 90 111 IPR013087 -
Arst5g04323 684 MobiDBLite consensus disorder prediction 291 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04323 Arst-Chr5 105062745 105068142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04323 20 681 C2H2 Transcription Factor Family AT4G25610 40.648 2.99e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst5g04323 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04323 - - aip:107644858 1300.42