Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04313 ATGGCTCCGAAGGCACCGAGTACGGGTCTTTTCGTTGGAATGAACAAGGGGCATATCGTCACCAAGAAGGAGCTGCCTCCCCGCCCCAGAGATCGCAAAGGAAAAACAAGCAAGAGGGTGCACTTTGTGAGGAATCTCATTCGCGAGGTTGCTGGTTTTGCGCCGTATGAAAAGCGTATAACTGAGTTGCTGAAGGTTGGAAAGGATAAGAGGGCATTGAAGGTTGCCAAGAGGAAGCTCGGTACCCATAAACGTGCCAAGAGGAAGAGAGAGGAGATGTCCAATGTCCTCAGAAAGATGAGGGCTGGTGGAGGCGGTGACAAGAAGAAGTAA 333 0.5105 MAPKAPSTGLFVGMNKGHIVTKKELPPRPRDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAGGGGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04313 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Arst5g04313 110 MobiDBLite consensus disorder prediction 79 110 - -
Arst5g04313 110 Gene3D 60S ribosomal protein L36 2 105 IPR038097 -
Arst5g04313 110 MobiDBLite consensus disorder prediction 1 38 - -
Arst5g04313 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 104 IPR000509 GO:0003735|GO:0005840|GO:0006412
Arst5g04313 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Arst5g04313 110 MobiDBLite consensus disorder prediction 87 110 - -
Arst5g04313 110 FunFam 60S ribosomal protein L36 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04313 Arst-Chr5 105029334 105030873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04313 8 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 84.466 3.13e-58 173