Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04308 ATGTTGAAGATGATCACAGGCATGTCAGGGTTGTTGCAGGTTTGGGCACCTGTGAGGAATGGCAACCGCTATGCACTCACAACTTCAGGTCAACCATTTGTTCTTGATCCACATAGTAATGGACTACATCAGTACAGAACAGTTTCCCTGATGTATATGTTTCCTGTTGATGGGGAGAATGATGAAATCTTGGGACTTCCCGGTCGAGTTTTTCAGCAGAAATTGCCAGAATGGACTCCCAATGTTCAGTATTATACAAGTAGAGAGTACTCTCGGAGAAACCATGCTCAACATTACAATGTCCGCGGAACGTTGGCTTTGCCTGTGTTTGAATCACCAGGGCAGTCATGTGTTGGTGTATTGGAGCTGATAATGACTTCAGAGAAGGTTAATTATGCTCCTGAGGTTGATAAAGTCTGCAAAGCCCTTGAGGCAGTGAATTTGAGGAGTTCAGAAATTCTGGAACATCCATTTGCTCAGATTTGCAACGAAGGTCGCCAGAATGCGTTAGCAGAGATTTTGGAGATATTGACAGTGGTATGTGAAACTCATAATTTACCTCTTGCACAAACATGGGTTCCCTGTAGGCATCGGAGTGTTTTGGCAAATGGCGGCGGTCTTAAGAAAAGCTGTTCTAGTTTTGATGGCCACTGCATGGGGCGAGTTTGCATGTCTGCCTCCGATGTAGCATTCTATGTCATTGATGCTCATACATGGGGTTTCCATGATGCTTGCGCCGAGCATCACTTACAACAAGGTCAAGGTGTTGCTGGCAGGGCATTTTTATCCCATAACATGAGCTTCTGTGGAAACATAACTCAATTCTGCAAAACTGATTATCCTCTAGTTCATTATGCTCTCATGTTTGGGTTAACCAGCTGTTTCGCAATCTGTTTACAAAGTTCTCATACCGGAAGTGATGATTATGTGTTGGAGTTTTTTCTGCCACCTAGCATCACAAACTTTTATGAACAAAAGGATTTGTTGGGATCTATATTGGCAACAATGAAGCAGAATTTCCAGAGTCTTAAGGTTGCTGCCGGTGTGGAACTCGAGGAGGGTTGTACAATTGAAGTTGTAGAACCAATAAATGAAAGAATTCATTTGAGCCTTGAATCTGTTCCAGTTGCTCAATCTGCTAAATCACCACCACCTACGCTCAACGCCTCGCTAAATAAGGATGATGGAGTGCCACAAGGTCCGCTAGAACAGCAAATGCCGGCATGGTTGGAAGATATAAATGATGGAGGGAATCTTGGTGATAATGCAGGTGGAAGCATGAATCCGATGACTTCCTTAGATGCTAAAATCAAGAAGAAACCCTCTGAAAGAAAACGTGGAAAAGCCGAGAAAATGATTAGTCTTGAAGTTTTGCAACGTTACTTTAGTGGAAGTCTGAAGGATGCTGCAAAGAGCCTTGGTGTTTGCCCGACGACTATGAAGCGTATCTGTAGGCAGCATGGAATATCTCGTTGGCCGTCAAGAAAGATCAATAAGGTTAACCGTTCCTTATCGAAGCTCAAGTGTGTCATTGAATCAGTCCGAGGTGCAGAAGGAGCATTTGCTTTGAATTCTGTAAATAAAGATCCACTTCCCATTGCTGCCGGTTCCTTTACCGAGCCTTGTACTTCAAAAATGTTCAACCGGAATGCCTCGTTGAGCATCCAGCCATCCAAGACTCGGATGAATGAAAATGATTTGGATACTTCGAGAGTATCAGAGACAAACCGACAGGTGAGGATGCAAGATCAATTGCTTGAAGGGGAACAGAGTCCTGAGAAGGTGATCCATGAAGAAGGTTGGTCTACTCAAGAAGTTGGCACTAAAGATCCAGAGAAGTTTAGAAATCTTAGTGGTTCAAGTGAAGATAGCGCAAATCCCCATTCTCACAATTCATGTCATGGTAGTCCCCCAAATGAAATTTCACCTGCAAATATATTCAGACCATTCAACAAAGAGAAATCTGTTCCGTTAGGAGTTTCGACAGAGTCAACAATGCAGCCAACTAATGCACTGAATTATGCAAATGCATATACTGCGCTTAACGTCGAGAGAACAGAACCTCAAGAACCATTTGGCAGAATGCTACTTGAGGGTGTTGGTAGTTCTAAAGACTTGAGAAATTTGTGCCCTTTGGAGGATCAAGCTTTAGAAGCTTGTGGGGTTAATCCACCATGTCATGACTTGGCTCCCAAGCAATGCATGATGGATACTACCCTTAATAGCAACAATACTATGATACCTTTTGCACCTAAGAAAGAGATGAAGAGTGTGACAATTAAGGCAACATATAAAGAAGATATCATAAGGTTTAGGGTGTTTTTGAACTGTGGCATTGTTGAACTGCAGGAAGAAATTTCAAAGAGATTGAAACTAGAAATTGGAGCATTTGATATAAAGTATCTGGACGATGATAATGAATGGGTTTTGATATCATGTGATGCAGATCTTCAGGAGTGCATGGATGTTTTAACTTCATCAGGAAGCAACATGATAAGGCTTGTGGTGCATGACACAGTTTCCATTCTTGGAAGCTCTTGTGAGAGCTCTGGGAACTGA 2559 0.4252 MLKMITGMSGLLQVWAPVRNGNRYALTTSGQPFVLDPHSNGLHQYRTVSLMYMFPVDGENDEILGLPGRVFQQKLPEWTPNVQYYTSREYSRRNHAQHYNVRGTLALPVFESPGQSCVGVLELIMTSEKVNYAPEVDKVCKALEAVNLRSSEILEHPFAQICNEGRQNALAEILEILTVVCETHNLPLAQTWVPCRHRSVLANGGGLKKSCSSFDGHCMGRVCMSASDVAFYVIDAHTWGFHDACAEHHLQQGQGVAGRAFLSHNMSFCGNITQFCKTDYPLVHYALMFGLTSCFAICLQSSHTGSDDYVLEFFLPPSITNFYEQKDLLGSILATMKQNFQSLKVAAGVELEEGCTIEVVEPINERIHLSLESVPVAQSAKSPPPTLNASLNKDDGVPQGPLEQQMPAWLEDINDGGNLGDNAGGSMNPMTSLDAKIKKKPSERKRGKAEKMISLEVLQRYFSGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKCVIESVRGAEGAFALNSVNKDPLPIAAGSFTEPCTSKMFNRNASLSIQPSKTRMNENDLDTSRVSETNRQVRMQDQLLEGEQSPEKVIHEEGWSTQEVGTKDPEKFRNLSGSSEDSANPHSHNSCHGSPPNEISPANIFRPFNKEKSVPLGVSTESTMQPTNALNYANAYTALNVERTEPQEPFGRMLLEGVGSSKDLRNLCPLEDQALEACGVNPPCHDLAPKQCMMDTTLNSNNTMIPFAPKKEMKSVTIKATYKEDIIRFRVFLNCGIVELQEEISKRLKLEIGAFDIKYLDDDNEWVLISCDADLQECMDVLTSSGSNMIRLVVHDTVSILGSSCESSGN 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04308 852 MobiDBLite consensus disorder prediction 618 639 - -
Arst5g04308 852 MobiDBLite consensus disorder prediction 556 645 - -
Arst5g04308 852 PANTHER PROTEIN NLP8 10 852 IPR045012 GO:0003700
Arst5g04308 852 Pfam PB1 domain 758 838 IPR000270 GO:0005515
Arst5g04308 852 SUPERFAMILY CAD & PB1 domains 756 842 - -
Arst5g04308 852 CDD PB1_NLP 758 838 IPR034891 -
Arst5g04308 852 SMART PB1_new 757 839 IPR000270 GO:0005515
Arst5g04308 852 Gene3D - 754 838 - -
Arst5g04308 852 ProSiteProfiles PB1 domain profile. 757 839 IPR000270 GO:0005515
Arst5g04308 852 Pfam RWP-RK domain 453 500 IPR003035 -
Arst5g04308 852 MobiDBLite consensus disorder prediction 590 617 - -
Arst5g04308 852 ProSiteProfiles RWP-RK domain profile. 439 520 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04308 Arst-Chr5 105012701 105016949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04308 719 850 NLP Transcription Factor Family AT1G64530 44.444 5.27e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst5g04308 PB1 6.1e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04308 - - gmx:100780901 1226.85