Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04306 ATGCCAAGTCCTGGGGTTGAAGGAGCACAAGCAGTAGCAATCAGAATATCAGGAGATCAAGCTGAATTCAAGGGTTGTGGATTCTTTGGAGCACAAGACACCCTTCATGATGATAAGGGTCGCCATTACTTCAGGGATTGCTATATCCAAGGCTCAATTGATTTCATATTTGGCGATGGAAGGTCCTTTTACGAGAATTGTGAAATAGTTTCTATAGCGAATCCAGTGCCACAAGGATACAGGAGCATAAATGGTGCAGTGACAGCTCATGGAAGAGTATCCATGGATGATAACACAGGATTTGTGTTTGTGAACAGCACAATAGGAGGGAGTGGGAGAATATGGTTAGGAAGGGCATGGAGACCATACTCACGTGTTGTTTTTGTGTCAACAACAATGTCAGATATCATTGCCCCTGAAGGTTGGAACGATTTCAATGACCCTTCAAGGGATCAGACCATATTCTATGGAGAGTACAATTGCTCTGGTCCCGGAGCTAGCATGGCAATGAGGGCACCATATGTGCAGAGATTAAACGATACACAAGCTCTTCCATTCCTCAACATAACTTTTATTGATGGTGACCAATGGTTGGAAAATTACACACAATTAATAACCTAA 621 0.4283 MPSPGVEGAQAVAIRISGDQAEFKGCGFFGAQDTLHDDKGRHYFRDCYIQGSIDFIFGDGRSFYENCEIVSIANPVPQGYRSINGAVTAHGRVSMDDNTGFVFVNSTIGGSGRIWLGRAWRPYSRVVFVSTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGPGASMAMRAPYVQRLNDTQALPFLNITFIDGDQWLENYTQLIT 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04306 206 Gene3D - 3 205 IPR012334 -
Arst5g04306 206 Pfam Pectinesterase 5 195 IPR000070 GO:0030599|GO:0042545
Arst5g04306 206 ProSitePatterns Pectinesterase signature 2. 49 58 IPR033131 -
Arst5g04306 206 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 199 - -
Arst5g04306 206 SUPERFAMILY Pectin lyase-like 5 199 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04306 Arst-Chr5 105006390 105007325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04306 1 199 Carbohydrate Esterase AT1G05310 72.362 1.70e-112 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04306 - - ahf:112696095 434.876