Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04300 ATGGAACAATCTGCCTCCTCCACTCTCACCGGACTTCTCCGCCGGGCAGCCGATACCTTCCCCTCCCGCCGCGCCATCTCTGTCGCCGGCAAGTTTGATCTCACCCACTCCCGCCTCCAACATCTTGTCGATATCGCAGCCAACCGCCTCATCTCCGCTGGCATCAAGCCCGGCGATGTCGTCGCTCTCACCTTCCCCAACACCGTCGAGTTTGTAATTACTTTCTTAGCTGTTATTCGAGCGCGTGCGACTGCAGCGCCACTTAACCCCGCGTACACTGCGGAAGAGTTCGAGTTTTATTTATCAGACTCAGAATCCAAACTTCTAGTAACTTCTTCTGAAGGAATCAAGCCGGCTCAAGCGGCGGCTTCCAAGCTCACCATCCCTTGCGCCGCGGCTTCATTAAATACACCCGAACAAGCCGATAATGAAGCAGCCGAAGCCGAATTCACCCTCTCCCTCAGCCACCGTCCTGACTCGGACTCTAACTCGGACCACGACTCGCTCTCCGGACTCACCAACGATCCTTCCGACGTGGCGCTCTTCCTCCACACCTCCGGCACCACGAGCCGCCCCAAGGGCGTGCCGCTGACTCAGCACAACCTCTTCTCTTCCGTTAGCAACATCCAATCGGTGTACCGACTCACTGAGTCAGACTCGACGGTGATCGTACTCCCTCTCTTCCACGTCCACGGCTTAATCTGCGGATTACTCAGCTCTATCGGCGCCGGAGCCGCCGTAGCCTTGCCGGCGGCGGGGAGATTCTCCGCGTCGACGTTCTGGAAAGACATGATCAAGTACAACGCCACGTGGTACACCGCGGTTCCAACGATACACCAGATCGTACTTGATCGCCACCAGAACAACCCCGAACCGGTTTACCCGAAGCTCCGGTTTATTCGTAGCTGCAGCGCGTCGCTGGCACCGGCTATTCTGGGTCGGTTGGAGGAGGCTTTCGGTGCACCGGTTTTGGAGGCTTATGCGATGACGGAAGCCTCTCATTTAATGGCTTCGAATCCGTTGCCGGAAGATGGGCCCCACAAGGCCGGGTCCGTTGGAAAGCCCGTGGGGCAAGAGATGGGCATATTGGATGAAACGGGTCGGGTCTTGGAGGCTGAGGTTAACGGTGAGGTTTGTATTAGGGGTCCCAATGTGACGAATGGTTATAAGAATAACCCAGATGCTAATACGGCGGCGTTTCAGTTTGGTTGGTTCCATACCGGTGATCTTGGTTACTTTGATTCTGACGGCTATTTGCATCTTGTGGGTCGGATCAAGGAGCTCATTAACCGTGGAGGAGAGAAAATATCACCAATAGAAGTGGATGCTGTCCTCCTATCTCATCCTGATATTGCTCAGGCGGTTGCTTTCGGAGTTCCCGATGACAAATACGGCGAGGAGATAAACTGTGCAATCATCCCAAGAGAAGGGTCAAACATTGATGAGGAAGAGGTGCTGAGATTTAGCAAGAAGAATCTTGCATCTTTCAAAGTCCCCAAGAAGGTCTTCATCACTGATTCATTGCCCAAGACAGCCACTGGCAAGATTCTACGCCGCCTAGTAGCTGAACATTTTGTCTCTCAAAAATGA 1590 0.5409 MEQSASSTLTGLLRRAADTFPSRRAISVAGKFDLTHSRLQHLVDIAANRLISAGIKPGDVVALTFPNTVEFVITFLAVIRARATAAPLNPAYTAEEFEFYLSDSESKLLVTSSEGIKPAQAAASKLTIPCAAASLNTPEQADNEAAEAEFTLSLSHRPDSDSNSDHDSLSGLTNDPSDVALFLHTSGTTSRPKGVPLTQHNLFSSVSNIQSVYRLTESDSTVIVLPLFHVHGLICGLLSSIGAGAAVALPAAGRFSASTFWKDMIKYNATWYTAVPTIHQIVLDRHQNNPEPVYPKLRFIRSCSASLAPAILGRLEEAFGAPVLEAYAMTEASHLMASNPLPEDGPHKAGSVGKPVGQEMGILDETGRVLEAEVNGEVCIRGPNVTNGYKNNPDANTAAFQFGWFHTGDLGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAIIPREGSNIDEEEVLRFSKKNLASFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQK 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04300 529 Pfam AMP-binding enzyme 14 431 IPR000873 -
Arst5g04300 529 CDD FACL_fum10p_like 21 523 IPR045310 GO:0016874
Arst5g04300 529 PANTHER ACYL-COA SYNTHETASE 5 527 - -
Arst5g04300 529 FunFam 4-coumarate--CoA ligase 2 427 528 - -
Arst5g04300 529 SUPERFAMILY Acetyl-CoA synthetase-like 7 526 - -
Arst5g04300 529 Pfam AMP-binding enzyme C-terminal domain 440 515 IPR025110 -
Arst5g04300 529 FunFam Peroxisomal-coenzyme A synthetase 8 424 - -
Arst5g04300 529 ProSitePatterns Putative AMP-binding domain signature. 182 193 IPR020845 -
Arst5g04300 529 Gene3D - 7 424 IPR042099 -
Arst5g04300 529 Gene3D - 425 527 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04300 Arst-Chr5 104913966 104917739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04300 1 528 Monolignol Biosynthesis Gene Families AT4G05160 29.533 2.76e-62 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04300 K22133 - gmx:100779306 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04300 5 104913966 104917739 Arst5g04300 5 104913966 104917739 ECH