Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04243 ATGCCTGGTTTCTCAGCTTTTGAGTTACCTCTTTCTTCTCCTCTCATTTCAATGTCAAAGCAAAATTTCCCTACCTTGTCTTTCTCCAATAGGGAAATGATGGAGGGCCACAGTGAACTGGGTCTTATTGGAGATCATTTTGACGGCGGTTTGCTGGGCAGGATTAAGGACGATGGGTATGAAAGCCGGTCCGGTAGCGACAATTTCGAAGGTGCATCTGGTGATGATCAAGAAGCTGCTAATGATCAGCCAAAGAGGAAAAAGAAATACCACAGGCACACTCCTCACCAAACTCAGGAGCTTGAAGCTTTCTTCAAGGATTGTAATCATCCTGATGAGAAGCAAAGGGCAGATCTTAGTAGAAGGCTTGGCTTGGAGAATAAGCAAGTCAAGTTCTGGTTTCAAAATCGACGAACCCAAATGAAGACGCAAATCGAGCGCCATGAGAACATGATTCTTAAGCAGGAAAATGAGAGGCTCCGAGCTGAGAACAGTGTGATGAGGGAAGCTATGGCAAACCCAATGTGCAACAACTGTGGTGGAGCAGCCATTCCAGGGCAAATTTCATTTGATGAGCATCAGATTAGAATTGAAAATGCTCGGTTGAAGGATGAATTGAACCGTATATGTGCCTTGGCGAACAAGTTTCTTGGCAGGCCAATCTCATCATTGGCCAGCCCCATGTCCTTGCCTGCCTCGAATTCTGGTCTAGAGCTCGGTATTGGCAGGAATGGTTTTAGTGGTGGTTCAAGCGGTCTTGGCATGTCAATGGGGCTTGATTTTGGGGACTTTTCAGGGGGCACTCTGCCTGCGATTTCTGGGATTAGATCACCGATGGGGTTGATGGGAAATGAAATCCATGCGGAGAGATCTATGCTATTGGAACTTGCATTAGTGGCTATGGACGAATTAATCAAGATGGCTCAGGCAGATAGCCCACTTTGGATTAAGATGGATGGCGGGAAGGAAATTCTGAACCAAGAAGAGTATGCAAGAATGTCTTCTTTTATTTCTCCAACATCTCCGGGATATGTAACTGAAGCTTCGAGAGAAACCGGTGTAGTAATAATCAACAGTTCAGCCCTCGTTGAAACAATGATGGACCCGGAACGATGGTCGGAGATGTTTCCTTCTATGGTTTCTAGAGCTGTAACCCTTGATGTTATAGCTAGTGGCATGGGTGGATCAAGAAATGGATCTTTGCAAGTGATGCAAGCGGAGATTCAATTGCTTTCGCCACTCGTTCCTGTTCGTCAATTGAGCTTCCTCAGGTTTTGCAAGCAGCATGCAGAAGGGTTGTGGGCAGTGGTAGATGCTTCAATTGATGCTGGTCGCAATTTTAAGAGGCTTCCATCAGGCTTTCTTGTGCAAGATACACCCAACGGTTTCTCAAAGATTACTTGGGTTGAGCATTCCCAATATGATGAGAGTCTCATTCACCAACTGTATCGGCCGTTGATTGCTTCCGGGCTCGGCTTCGGCGCTCCTAGATGGATTGCCACTCTCCAAAGGCAGTGTGAATGTTTGGCAATACACATGTCCTCTTCAATCCCAAGCGAGGACGCCACAGCCATAAGCCCAGCTGGTAGGAGAAGCATGCTGAAGCTTGCGCAACGCATGGCTAATAACTTCTTTTCTGGGATTTGTCTGTCTTCATCGCAAAAATGGGACACACACCATCTCGGCAATGTTGGTGATGAGATCAAAGTTATGACCCGGAAAAACACTGATGTCCCCGGTGAGCCCCCTAGCATCGTCTTGTGTGCGGCCACTTCAGTCTGGATGCCGGTGTCGCGGCAGAGGGTGTTTGACTTCTTGCGTGACGAACGGATGAGAGGGGAGTGGGTCATCTTATCCGGCATTGGACAAATGAAGGAGATGCTTCGCATTTCCAAAGGACAAGTTGATGGAAATTCCTTATCGGTCCTTCGTGCTAATGCTAATAATGGCGGCGAGAGCAGCAACAACACGCTGTTTTTGCAGGAGACATGGAACGATACCTCATGCTCGGCGTTGCTGTATTCGCCGGTGGAGGTGGAATCGTTGAAAGTGGTAATGAGTGGAGGAGATTCCACATATGTTGCACTCATCCCTTCAGGCTTTACCATTCATCCGGATGGTCATTCCGGCACACAAGATGGAGATGACGGTGGCAGTTCCGGATGCCTGCTCACAGTTGGGCTACAGATATTGCTGAACAGCCTCCCCACGGCCAAGCTCACGGCGGAGTCAGTCGAAACCGTGAACGACCTCATCACAGGCACCATTCAGAAGATCAAAGCTTCACTAGGAGTTGCGTAG 2301 0.4802 MPGFSAFELPLSSPLISMSKQNFPTLSFSNREMMEGHSELGLIGDHFDGGLLGRIKDDGYESRSGSDNFEGASGDDQEAANDQPKRKKKYHRHTPHQTQELEAFFKDCNHPDEKQRADLSRRLGLENKQVKFWFQNRRTQMKTQIERHENMILKQENERLRAENSVMREAMANPMCNNCGGAAIPGQISFDEHQIRIENARLKDELNRICALANKFLGRPISSLASPMSLPASNSGLELGIGRNGFSGGSSGLGMSMGLDFGDFSGGTLPAISGIRSPMGLMGNEIHAERSMLLELALVAMDELIKMAQADSPLWIKMDGGKEILNQEEYARMSSFISPTSPGYVTEASRETGVVIINSSALVETMMDPERWSEMFPSMVSRAVTLDVIASGMGGSRNGSLQVMQAEIQLLSPLVPVRQLSFLRFCKQHAEGLWAVVDASIDAGRNFKRLPSGFLVQDTPNGFSKITWVEHSQYDESLIHQLYRPLIASGLGFGAPRWIATLQRQCECLAIHMSSSIPSEDATAISPAGRRSMLKLAQRMANNFFSGICLSSSQKWDTHHLGNVGDEIKVMTRKNTDVPGEPPSIVLCAATSVWMPVSRQRVFDFLRDERMRGEWVILSGIGQMKEMLRISKGQVDGNSLSVLRANANNGGESSNNTLFLQETWNDTSCSALLYSPVEVESLKVVMSGGDSTYVALIPSGFTIHPDGHSGTQDGDDGGSSGCLLTVGLQILLNSLPTAKLTAESVETVNDLITGTIQKIKASLGVA 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04243 766 FunFam Homeobox-leucine zipper protein HDG1 73 160 - -
Arst5g04243 766 SUPERFAMILY Homeodomain-like 74 144 IPR009057 -
Arst5g04243 766 SUPERFAMILY Bet v1-like 527 750 - -
Arst5g04243 766 Pfam START domain 296 508 IPR002913 GO:0008289
Arst5g04243 766 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Arst5g04243 766 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Arst5g04243 766 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Arst5g04243 766 MobiDBLite consensus disorder prediction 58 96 - -
Arst5g04243 766 Gene3D - 73 160 - -
Arst5g04243 766 SMART START_1 295 508 IPR002913 GO:0008289
Arst5g04243 766 CDD homeodomain 87 144 IPR001356 GO:0003677
Arst5g04243 766 ProSiteProfiles START domain profile. 286 511 IPR002913 GO:0008289
Arst5g04243 766 SUPERFAMILY Bet v1-like 289 508 - -
Arst5g04243 766 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 85 763 IPR042160 -
Arst5g04243 766 CDD START_ArGLABRA2_like 290 507 - -
Arst5g04243 766 Coils Coil 138 173 - -
Arst5g04243 766 SMART HOX_1 86 148 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04243 Arst-Chr5 104449749 104453946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04243 4 763 Homeobox Transcription Factor Family AT3G61150 54.534 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst5g04243 START 8.6e-42 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04243 K09338 - gmx:100785102 1035.4