Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04195 ATGGCACCTTCTCGGGTGGCTGGAGGGTTAACCCAATCATCATCAGGTTCTGGAATTTTCTTTCAAGGAGATGGGCAGTCACAGAGTGTAGTCAACTCTCACATAAGCTCATCATTCGGTAACTCATCTAATGCGGTCCCTGGAGCTGGTCGTTCTCACCTGGGTCCAGTGTCTGGGGATATGAATAATGCAGTTTTGAACAGTGTGGCAAACTCAGCACCAAGTGTTGGAGCTAGCTCTTTAGTCACAGATGCAAATTCAGCATTCTCTGGGTCATCAGTTATGGATGGTTCCAGTGTAGTACAGCAGAGCTCTCACCAAGATCAGAATGTTCAACCATTGCAACAGAATCAGCAGCATGGTGCCTCTAGTGCTATGTCTATGCCTGGATCTCAAAGTGCCCCTTCCCCGCTTCCAATGGGTGCACAAATACCAGGATCTTTCATGCAAAATACGGATAATTTATCCCAGCTGTCCAAAAAACCTAGGCTGGATATTAAGCAGGAGGATTTAATGCAACAGCAGGTTATACAACAGCTTCTTCAAAGACAGGACACCATGCAATATCAGGGGCGTAATCCACAAATACAGGCTTTGATTCAGCAGCAGCAAAGACTGAGGCAACAACATATCCTTCAGTCAATGCCACAGTTACAGCGAGCACACTTGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAACAACAAATGCATTTGAGGCAGCAGCAATTACAGCAACAATCAATGCAATCTGCAGTAAAGCGCCCGTATGACAGCAGCGTTAATGGAGTATGTGCTCGCAGATTGATGCAATACCTCTATCATCAAAGGCAACGCCCAAGTGAAAACACTATTGCCTATTGGAGAAAATTTGTGGCCGAGTATTACTCTCCTCGAGCAAAGGAACGGTGGTGCTTGTCTTTGTATAATAATGTTGGGCATCATGCACTCGGTGTTTTCCCTCAGGCATCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTGCTCCCTAGACTTAATGACATCAAATTTGGTAGTGGAGTAATTGACGAACTTCTCTTTTTGGAGTTGCCACGCGAACAAAGATTTCCTTCTGGTGTAATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGCGTATACGAGCAACTTCGTGTTGTTCGTGAGGGTCACCTGCGTATTATATTTACACAAGACCTTAAGATATTATCTTGGGAGTTCTGTGCCAGGCGCCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTAAACCAGTTGGTCCAAGTAGCTCAAAAATGTCAGAGTACAATTGCTGAAAGTGGTTCAGATGGGGTTTCTCAGCAAGATCTGCAAACAAACAGCAATATGGTTTTGGCTGCTGGCCGTCAACTTGCAAAGAGTCTGGAGTTGCAATCTCTAAATGATTTAGGTTTTTCCAAAAGATATGTAAGATGTTTGCAGATATCTGAGGTTGTCAATTCCATGAAAGATCTGATAGATATCTGTCGGGAGCACAAAATTGGGGCAATTGAGAGCTTGAAAAATTATCCTCGTTTTGCAACCGCGGCTAAGCTCCAGATGCAAAAAATGCATGAGATGGAACAGCTAGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACGATTAACAAACTAATGGCAATGAATCCTAGTTTGAACAACCCAATAAATAATAATCCTAATATGATAAATCGTGGTGGTTTGAGTGGATCAGCACAAGCTGCTCTGGCACTTAACTACCAGAGTCTTCTTATGAGGCAAAACTCGATGAATTCAAGCCCCGGCTCAATTCAGAGAGAAGGATCATCATCTTTCAACAATGCGAACCAGAGTCCGTCGTCAGCTATGCAAGGTGCTACCTCTCCCTTTATTCCAGGCTCAATGCAGAATTCACCAATTGGTGGTTTCCCAAGTCCCCATCTACCCCCGCAGCAGCAACAGCAGCAGCCGCAACAACACCTTCAACAGAGATCCTTAAGTGCAAATAGCTTCATGCAACAAAACCATTCACAGGGATCCCAAGGAAATCAAGCTCTACAGCAGCAGATGATCCAGCAACTGCTGATGTCAAATAACAATGGGGGAGTACAATCACAATCTCTTAGTGGACCCAATGCAAATGGGAGCATAGCAAAGAATGGGTTGGGTTTCGGAGGACACTCTCCGTCTCCTTCCATAACTGGAGGATCTGTCAATGTTTCAGGAAATAAAGGTCCGGTTTCAAGGAGCAATAGCTTCAAATCGGCCTCAAACAGTGATTCTTCTCCGGCTGGTGGCAACAATGGATTCAACCCAAGAACTTCGGATATGCCGCAGAATCTGCATTTGCAAGATGTGGTTCCAGATATTGCCAGTGATTTTACAGATAGCCCCTTCTTCAGTAGTGATCTGGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2490 0.447 MAPSRVAGGLTQSSSGSGIFFQGDGQSQSVVNSHISSSFGNSSNAVPGAGRSHLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSAFSGSSVMDGSSVVQQSSHQDQNVQPLQQNQQHGASSAMSMPGSQSAPSPLPMGAQIPGSFMQNTDNLSQLSKKPRLDIKQEDLMQQQVIQQLLQRQDTMQYQGRNPQIQALIQQQQRLRQQHILQSMPQLQRAHLQQQQQQQQQQQQQQMHLRQQQLQQQSMQSAVKRPYDSSVNGVCARRLMQYLYHQRQRPSENTIAYWRKFVAEYYSPRAKERWCLSLYNNVGHHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNDIKFGSGVIDELLFLELPREQRFPSGVMMLEYAKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGVSQQDLQTNSNMVLAAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICREHKIGAIESLKNYPRFATAAKLQMQKMHEMEQLANVQGLPTDRNTINKLMAMNPSLNNPINNNPNMINRGGLSGSAQAALALNYQSLLMRQNSMNSSPGSIQREGSSSFNNANQSPSSAMQGATSPFIPGSMQNSPIGGFPSPHLPPQQQQQQPQQHLQQRSLSANSFMQQNHSQGSQGNQALQQQMIQQLLMSNNNGGVQSQSLSGPNANGSIAKNGLGFGGHSPSPSITGGSVNVSGNKGPVSRSNSFKSASNSDSSPAGGNNGFNPRTSDMPQNLHLQDVVPDIASDFTDSPFFSSDLDDNMGFGWKA 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04195 829 MobiDBLite consensus disorder prediction 714 731 - -
Arst5g04195 829 Pfam LIM-domain binding protein 269 529 IPR029005 -
Arst5g04195 829 MobiDBLite consensus disorder prediction 92 153 - -
Arst5g04195 829 MobiDBLite consensus disorder prediction 7 48 - -
Arst5g04195 829 PANTHER LIM DOMAIN-BINDING PROTEIN 43 813 IPR029005 -
Arst5g04195 829 MobiDBLite consensus disorder prediction 745 796 - -
Arst5g04195 829 MobiDBLite consensus disorder prediction 611 681 - -
Arst5g04195 829 MobiDBLite consensus disorder prediction 1 57 - -
Arst5g04195 829 MobiDBLite consensus disorder prediction 714 799 - -
Arst5g04195 829 Coils Coil 223 243 - -
Arst5g04195 829 MobiDBLite consensus disorder prediction 92 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04195 Arst-Chr5 104144504 104150280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04195 264 533 C2H2 Transcription Factor Family AT1G43850 60.370 3.58e-108 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04195 - - gmx:100816886 1124