Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04187 ATGAATGTGCCTAACTTGACTAGGGAAAATGTTGCCAGTCACTTGCAGAAATACCGAATATTTCTGAGAAAAATTGCAGAGAAAGGGATAATTGCAGGAATATCTGATAGAACACTAAGGTCAAGGTTCGCTGCTGAGCTTCCAATTAAGATGATCAGAGCGTTACAAGCCTTATATGAGAAGCTTAAAAATAATAATAATTTTGGAACCCCCTTACCCATTTCATTGATCCAAGCTCTCCTTGATTACCATCACCCTTACAACCCTAATTTTCCTTACCTCATTCCAACCAATAATAACACAGCCTTGAACCAAGTCATGAGTCTTGGAGTTGCACCCCAATTCCTTGGACCAAAAGCTCCTATTGGTAATGCCAACAACAACACTATGATCCACCATCAGCTTCCAATTTATGCTCCATATGATCCACTATGA 435 0.3954 MNVPNLTRENVASHLQKYRIFLRKIAEKGIIAGISDRTLRSRFAAELPIKMIRALQALYEKLKNNNNFGTPLPISLIQALLDYHHPYNPNFPYLIPTNNNTALNQVMSLGVAPQFLGPKAPIGNANNNTMIHHQLPIYAPYDPL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04187 144 Gene3D - 1 26 - -
Arst5g04187 144 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 135 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04187 Arst-Chr5 103979306 103981716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04187 1 43 Response Regulator Gene Family AT5G07210 67.442 9.85e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst5g04187 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04187 - - adu:110281620 295.434