Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04183 ATGGAGCCACTTTTAACCGTTATTTTTGTTGTAAACATGAACACTGTATGGGAGAAAGTTATGTCAACTCTTAGAGCTCAGATCTTTGGCAGAATATTGATTCAAAAGGTTGAATTTTTCGACAAATACAAGGTTGGAGAACTCACTGGTTTGTTAACATCTGATCTGGGTTCCCTTAAAGATATTGTGAGCGAGAATGTCTCAAGGGATCGCGGTTTCAGGGCATTATCTGAGGTCATTGGGACAATATTCATTCTTTTTTCTTTATCCCCTCAGCTAGCCCCACTTCTTGGTATTCTGATGCTCACGGTTTCTGTCTCAGTCGCTGTCTACAAGAGATCAACATTTCCTGTTTTCAAAGCACATGGGTTGGCCCAAGCATCAATAGCTGATTGTGTATCAGAAACATTCTCTGCTATTCGAACAGTAAGATCTTTTGGTGGTGAAAAGCGGCAGATGTTTACATTTGCTAAACAGGTTCTGTCTTTCCAGTCAAGTGGGATAAAGCTTGGTACTTTCAAATCATTTAATGAATCTATGACCAGGGTTGCTGTTTATATCTCTTTGATTTCATTATATTGTCTTGGAGGGAACAAAGTTAAGGCGGGTGAGCTCTCTGTCGGAGCTATGGCATCTTTTATTGGATATACTTTCACTTTAACATTTGCTGTTCAAGGACTGGTTAATACCTTTGGGGATCTTCGAGGAGCTTTTGCGGCCGTTGACAGGATCAACTCTGTTTTATCTGGAGTTCAAGTTGATGATTCTCTTGCCTATGGCTTAGAAAGAGAACTAAGGCAACAGAAAGCAGTGGATGATGAGAAATATAAATTATTCTTCTCTAATAGTTCAACTGAGAAAAACCAAATGCATTACATGTCGGCACTAAAAACATCTAGCAATTTGTTTAGCTTGGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTCTATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTACGTGGGTTAAATTTAAAACTAAATTGTGGAACTGTAACTGCACTGGTAGGTTCTAGTGGCGCAGGCAAAAGTACCATAGTGCAGCTATTGGCTAGATTCTATGAGCCAGCAAGAGGTTGCATAACGGTTGCGGGAGAGGATGTAAGAACATTTGACAAGAGCGAATGGGCCCGGGTTGTCTCTATTGTAAATCAAGAGCCTGTTCTCTTCTCGGTGTCGGTTGGAGAAAATATTGCATATGGTCTTCCAGATGAGAATGTTTCTAAGGAGGATGTCATTAAGGCAGCAAAAGCTGCCAATGCTCATGATTTTATCATCTCACTTCCACAGGGCTATGATACACTTGTCGGTGAGCGTGGAGGCCTATTGAGTGGAGGACAGAGAGAATCGCCATAG 1383 0.41 MEPLLTVIFVVNMNTVWEKVMSTLRAQIFGRILIQKVEFFDKYKVGELTGLLTSDLGSLKDIVSENVSRDRGFRALSEVIGTIFILFSLSPQLAPLLGILMLTVSVSVAVYKRSTFPVFKAHGLAQASIADCVSETFSAIRTVRSFGGEKRQMFTFAKQVLSFQSSGIKLGTFKSFNESMTRVAVYISLISLYCLGGNKVKAGELSVGAMASFIGYTFTLTFAVQGLVNTFGDLRGAFAAVDRINSVLSGVQVDDSLAYGLERELRQQKAVDDEKYKLFFSNSSTEKNQMHYMSALKTSSNLFSLAWSGDVCLEDVYFSYPLRPDVEILRGLNLKLNCGTVTALVGSSGAGKSTIVQLLARFYEPARGCITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDENVSKEDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRESP 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04183 460 Pfam ABC transporter 329 458 IPR003439 GO:0005524
Arst5g04183 460 Gene3D - 307 457 IPR027417 -
Arst5g04183 460 Gene3D ABC transporter type 1, transmembrane domain 2 252 IPR036640 GO:0005524|GO:0016020
Arst5g04183 460 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 236 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g04183 460 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 3 458 IPR039421 -
Arst5g04183 460 Pfam ABC transporter transmembrane region 12 223 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g04183 460 SUPERFAMILY ABC transporter transmembrane region 4 249 IPR036640 GO:0005524|GO:0016020
Arst5g04183 460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 303 458 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04183 Arst-Chr5 103930069 103934126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04183 309 458 Calmodulin-binding Proteins AT2G36910 47.333 4.79e-40 152