Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04182 ATGCTCACGGTTTCTGTCTCAGTCGCTGTCTACAAGAGATCAACATTTCCTGTTTTCAAAGCACATGGGTTGGCCCAAGCATCAATAGCTGATTGTGTATCAGAAACATTCTCTGCTATTCGAACAGTAAGATCTTTTGGTGGTGAAAAGCGGCAGATGTTTACATTTGCTAAACAGGTTCTGTCTTTCCAGTCAAGTGGGATAAAGCTTGGTACTTTCAAATCATTTAATGAATCTATGACCAGGGTTGCTGTTTATATCTCTTTGATTTCATTATATTGTCTTGGAGGGAACAAAGTTAAGGCGGGTGAGCTCTCTGTCGGAGCTATGGCATCTTTTATTGGATATACTTTCACTTTAACATTTGCTGTTCAAGGACTGGTTAATACCTTTGGGGATCTTCGAGGAGCTTTTGCGGCCGTTGACAGGATCAACTCTGTTTTATCTGGAGTTCAAGTTGATGATTCTCTTGCCTATGGCTTAGAAAGAGAACTAAGGCAACAGAAAGCAGTGGATGATGAGAAATATAAATTATTCTTCTCTAATAGTTCAACTGAGAAAAACCAAATGCATTACATGTCGGCACTAAAAACATCTAGCAATTTGTTTAGCTTGGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTCTATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTACGTGGGTTAAATTTAAAACTAAATTGTGGAACTGTAACTGCACTGGTAGGTTCTAGTGGCGCAGGCAAAAGTACCATAGTGCAGCTATTGGCTAGATTCTATGAGCCAGCAAGAGGTTGCATAACGGTTGCGGGAGAGGATGTAAGAACATTTGACAAGAGCGAATGGGCCCGGGTTGTCTCTATTGTAAATCAAGAGCCTGTTCTCTTCTCGGTGTCGGTTGGAGAAAATATTGCATATGGTCTTCCAGATGAGAATGTTTCTAAGGAGGATGTCATTAAGGCAGCAAAAGCTGCCAATGCTCATGATTTTATCATCTCACTTCCACAGGGCTATGATACACTTGTCGGTGAGCGTGGAGGCCTATTGAGTGGAGGACAGAGGCAGAGAATCGCCATAGCCCGAGCTATCTTAAAGAATGCTCCAATCCTTATACTGGACGAGGCCACGAGTGCGCTGGATGCTGTCAGCGAGCGGCTGGTACAAGAAGCTCTCAACCATTTGATGAAAGGGAGGACGACACTAGTTATAGCTCATCGATTAAGCACGGTTCAAAATGCTCATCAAATTGCGCTTTGTTCCGAAGGGAGGATCGCGGAACTAGGCACACATTTTGAGCTATTGGCTAAGAAGGGCCAATATGCTTCCCTGGTTAGCACTCAGAGGCTTGCATTTGAATGA 1368 0.4298 MLTVSVSVAVYKRSTFPVFKAHGLAQASIADCVSETFSAIRTVRSFGGEKRQMFTFAKQVLSFQSSGIKLGTFKSFNESMTRVAVYISLISLYCLGGNKVKAGELSVGAMASFIGYTFTLTFAVQGLVNTFGDLRGAFAAVDRINSVLSGVQVDDSLAYGLERELRQQKAVDDEKYKLFFSNSSTEKNQMHYMSALKTSSNLFSLAWSGDVCLEDVYFSYPLRPDVEILRGLNLKLNCGTVTALVGSSGAGKSTIVQLLARFYEPARGCITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDENVSKEDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARAILKNAPILILDEATSALDAVSERLVQEALNHLMKGRTTLVIAHRLSTVQNAHQIALCSEGRIAELGTHFELLAKKGQYASLVSTQRLAFE 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04182 455 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 136 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g04182 455 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 211 449 IPR003439 GO:0005524
Arst5g04182 455 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 2 453 IPR039421 -
Arst5g04182 455 Pfam ABC transporter transmembrane region 4 123 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst5g04182 455 SUPERFAMILY ABC transporter transmembrane region 6 149 IPR036640 GO:0005524|GO:0016020
Arst5g04182 455 Pfam ABC transporter 229 380 IPR003439 GO:0005524
Arst5g04182 455 CDD ABC_MTABC3_MDL1_MDL2 213 450 - -
Arst5g04182 455 SMART AAA_5 238 432 IPR003593 GO:0016887
Arst5g04182 455 Gene3D ABC transporter type 1, transmembrane domain 1 166 IPR036640 GO:0005524|GO:0016020
Arst5g04182 455 Gene3D - 209 452 IPR027417 -
Arst5g04182 455 ProSitePatterns ABC transporters family signature. 352 366 IPR017871 GO:0005524|GO:0016887
Arst5g04182 455 FunFam ATP-binding cassette sub-family B member 8, mitochondrial 209 453 - -
Arst5g04182 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 450 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04182 Arst-Chr5 103929767 103933934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04182 208 455 Calmodulin-binding Proteins AT2G36910 54.582 3.55e-78 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04182 K05657 - gmx:100791034 791.186