Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04139 ATGGCCACAAAACCAAGAAACTCCAACACTAAGGTGTCTCTCATGGTCATGGTTACAATAATCCTAACAACATCCAATGTTGTTCTATGTGATGATAAAACTCCAGTTCCAACTGACAGGGGACAACTGGAATCATGGTTCAACCAAAATGTGGGTCCATTGGAACAAAGAAAGAGCACTTTGGACCCTGCTCTTGTGGCGGCCGAGCAAGGTCCTAAAGTGGTTAAGGTAATGCAAGACGGTAGCGGCGATTTCAAGACCATCACCGACGCCGTCAATAGCGTCCCTTCCGGGAATGCCAAGCGGGTGATAATCTCCATAGGTGCTGGGAATTACAATGAGAAGATCAAGATTGAAAGGACCAAGAATTTCATCACGTTTTATGGCGCACCTGGAGGGAACTTACCAACCTTGTCCTATGGTGGCACTGCACAACAATATGGCACCGTTGACAGTGCTACGTTGATTGTTGAATCTGATTATTTCGTCGCTGCTAACATCCAAATCTCGAATACTGCACCAAGACCTGATGGAAAGAGGCCTGGAGCACAAGCAGTAGCATTAAGAATTTCTGGAGACAAAGCAGCGTTTTATAATTGCAAGCTGTTGGGATTCCAAGACACAATCTGTGACGATAGACATAGGCATTTTTTCAAGAACTGCTTAGTTCAAGGCACCGTCGATTTTATTTTCGGAAGCGGGAGGTCATTGTACCTGAACACGGAGTTGAGGGTTCTTGGCGACAGTGGAATGACAGTGATAGTGGCACAAGCAAGAACAATGGACTCACAGGACACTGCCTACGCATTTGTGCATTGCGACGTTACCGGAACAGGGACTGGCTCTTACTTGGGTAGAGCATGGATGTCTAATCCCAAAGTCATTTTTGCTTACACCACCATGACCAGTGTTATCAATCCTGTTGGTTGGAGTGACAACATGCACACTGAATATGATAGAACTTTATATTTTGGAGAGTATAAAAACTCTGGAGCTGGAGCTGCTCCCGCTGGGCGTGCCAAATTCTCAAAGCAGCTAAGTGATGCAGAGGCACAACCCTTCCTCAATCTTGGTTTCATTGACGGTTCCAGTTGGCTACTTCCTCCACCAAGAGTCTAA 1119 0.4593 MATKPRNSNTKVSLMVMVTIILTTSNVVLCDDKTPVPTDRGQLESWFNQNVGPLEQRKSTLDPALVAAEQGPKVVKVMQDGSGDFKTITDAVNSVPSGNAKRVIISIGAGNYNEKIKIERTKNFITFYGAPGGNLPTLSYGGTAQQYGTVDSATLIVESDYFVAANIQISNTAPRPDGKRPGAQAVALRISGDKAAFYNCKLLGFQDTICDDRHRHFFKNCLVQGTVDFIFGSGRSLYLNTELRVLGDSGMTVIVAQARTMDSQDTAYAFVHCDVTGTGTGSYLGRAWMSNPKVIFAYTTMTSVINPVGWSDNMHTEYDRTLYFGEYKNSGAGAAPAGRAKFSKQLSDAEAQPFLNLGFIDGSSWLLPPPRV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04139 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 66 366 - -
Arst5g04139 372 ProSitePatterns Pectinesterase signature 2. 223 232 IPR033131 -
Arst5g04139 372 Gene3D - 71 368 IPR012334 -
Arst5g04139 372 SUPERFAMILY Pectin lyase-like 73 366 IPR011050 -
Arst5g04139 372 FunFam Pectinesterase 70 368 - -
Arst5g04139 372 Pfam Pectinesterase 75 362 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04139 Arst-Chr5 103478759 103481077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04139 10 372 Carbohydrate Esterase AT1G69940 56.749 1.43e-151 430