LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g04117	ATGGAAAAGAGACAAGGGAACATAGCTTTCTTTCTTTTAGCTTTCTTCTTGTGCTTCTTCATGTGGACTTCTTCAGTTACTGCTTTGCTTTCTTCTAAAGGTGTCAATTATGAAGTTGTAGCTTTGATAGACTTGAAGAGCAATCTAAAGGATCCTCGTAATGTTCTTAGTAATTGGGATGATAATGCTGTTGATCCTTGCAGTTGGGCCATGGTTTCTTGTTCTGCTGATCGTTTTGTTGTTACTCTAGCAATTCCAAGCCAAAATTTATCTGGTACACTTTCACCAAGCATAGGCAACTTAACAAACCTTCAGACTGTGTGAGTAAACTTAAATAATATAACAGGACCTATACCCTCTGAGATTGGGAGGCTACAGAAGCTTGAAACTCTTGATCTTTCTGAGAACTCTTTCATTGGTCAACTTCCAGATACTCTGTCCCATATGAATGGTCTCCATTATTTGCGGTTAAATAACAACAGTTTCTATGGAGCAATTCCTTCCTCTTTAGCTGATATGTCCCAGCTTGCCTTTCTGGACATCTCTTACAATAACTTGAGTGGACCAGTGCCTAGAATAAATGCAAAATCATTCAATATTGTAGGCAATCCTCAAATATGTAATAGCAATGGACTCGAGCAGCACTGTTTCAAAACAACACTGATTCCTTCTGCCATTAATAGTTCTCAAGATTCACAATCCTCCAATGGACCAAAGAGCCACAAAATGGCGTTGGCGGTTGCTTCAAGCCTAAGCTGCATCTGCTTACTAATTCTTGGGTTCGGATTCCTCCTTTGGTGGAGACAAAGATATAACAAGCAAATATTCTTTGATGTTAATGAACAACACCATGAAGAGGTTTGCCTAGGGAACCTGAAGAAATTCAATTTCAGAGAACTTCAAGTTGCAACAAACAACTTCAGCAGCAAGAACTTGGTTGGAAAAGGTGGTTTTGGAAATGTGTACAAAGGGTACCTTCCAGATGGTACAGCCATAGCAGTGAAGAGGCTGAAAGATGGTAATGCCATTGGTGGTGAGATCCAATTCCAGACAGAAGTTGAGATGATCAGCTTAGCTGTCCACCGGAATCTCCTTCGCCTTTATGGATTTTGCATGACAGCAACGGAGAGGCTCTTGGTTTACCCCTACATGTCCAACGGCAGTGTCGCCTACCGTCTTAAAGTGAAGCCAGGCCTGGATTGGGGTACAAGGAAGAGAATAGCAATAGGAGCTGCAAGAGGATTGCTATATCTGCATGAGCAGTGTGATCCAAAGATTATTCATAGGGATGTGAAAGCTGCAAACATCTTGCTGGATGATTACTGTGAGGCAGTTGTAGGAGATTTTGGACTGGCAAAGTTGTTGGATCACCGCGACTCGCACGTGACAACGGCCGTTAGAGGGACTGTAGGGCACATAGCCCCTGAATATCTCTCAACTGGTCAGTCCTCTGAGAAAACTGATGTCTTTGGCTTTGGAATCCTTCTTCTTGAGCTCATTTCTGGCCAAAGAGCCCTTGAATTTGGGAAAGCAGCAAATCAGAAAGGAGCTATGCTTGATTGGGTGAAGAAGATCCATCTAGAGAAGAAAATAGACTTGCTAGTTGACAAGGAACTGAAGAATAACTATGACAGGATTGAGCTTGATGAGATTGTTCAAGTAGCTTTGTTATGCACTCAATACCTTCCAAGCCATAGGCCAAAGATGTCTGAGGTAGTTAGGATGCTTGAAGGAGATGGTCTTGCTGAGAAATGGGAGGCATCACAGACAGCAGAGTCGACTCGAAGCAGAGGGAATGAACTCTCTTCTTCGGAGCGATACTCCGATCTCACTGATGACTCTTCATTGCTTGCCCAAGCAATGGAACTTTCCGGACCAAGATAA	1884	0.4268	MEKRQGNIAFFLLAFFLCFFMWTSSVTALLSSKGVNYEVVALIDLKSNLKDPRNVLSNWDDNAVDPCSWAMVSCSADRFVVTLAIPSQNLSGTLSPSIGNLTNLQTVXVNLNNITGPIPSEIGRLQKLETLDLSENSFIGQLPDTLSHMNGLHYLRLNNNSFYGAIPSSLADMSQLAFLDISYNNLSGPVPRINAKSFNIVGNPQICNSNGLEQHCFKTTLIPSAINSSQDSQSSNGPKSHKMALAVASSLSCICLLILGFGFLLWWRQRYNKQIFFDVNEQHHEEVCLGNLKKFNFRELQVATNNFSSKNLVGKGGFGNVYKGYLPDGTAIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTATERLLVYPYMSNGSVAYRLKVKPGLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHLEKKIDLLVDKELKNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQTAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g04117	627	Pfam	Protein kinase domain	308	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g04117	627	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	35	218	-	-
	Arst5g04117	627	SUPERFAMILY	Protein kinase-like (PK-like)	292	581	IPR011009	-
	Arst5g04117	627	ProSitePatterns	Protein kinases ATP-binding region signature.	313	335	IPR017441	GO:0005524
	Arst5g04117	627	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	12	587	-	-
	Arst5g04117	627	ProSiteProfiles	Protein kinase domain profile.	307	562	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g04117	627	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	426	438	IPR008271	GO:0004672\|GO:0006468
	Arst5g04117	627	MobiDBLite	consensus disorder prediction	585	627	-	-
	Arst5g04117	627	Pfam	Leucine rich repeat N-terminal domain	36	75	IPR013210	-
	Arst5g04117	627	FunFam	Somatic embryogenesis receptor-like kinase 1	384	596	-	-
	Arst5g04117	627	SUPERFAMILY	L domain-like	37	309	-	-
	Arst5g04117	627	Gene3D	Phosphorylase Kinase; domain 1	276	383	-	-
	Arst5g04117	627	Gene3D	Ribonuclease Inhibitor	35	216	IPR032675	-
	Arst5g04117	627	MobiDBLite	consensus disorder prediction	587	618	-	-
	Arst5g04117	627	Pfam	Leucine rich repeat	102	161	IPR001611	GO:0005515
	Arst5g04117	627	FunFam	Somatic embryogenesis receptor kinase 1	276	383	-	-
	Arst5g04117	627	SMART	serkin_6	307	562	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g04117	627	Gene3D	Transferase(Phosphotransferase) domain 1	384	596	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g04117	Arst-Chr5	102874943	102883876	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst5g04117	9	627	Receptor kinase-like Gene Family	AT5G16000	72.452	0.0	924

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Arst5g04117		Pkinase	5.6e-41	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g04117	-		-	gmx:100790194	1028.08