Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04112 ATGGCAAATGACACTTCTGGTGCTGATTCCCATCATAAACGTCTTGGCCTTTTGAAAGATCAAGTTCACTTGGTTAAAAGGAAAGATTCTGATCGCTATGAGGTTGCATCAATCCAAGATCAATTATCATTTGAAAAGGGATTTTTCATAGTAATTCGTGCATGCCAAATGTTAGCGCAAAAGAATGATGGAATAATATTGGTGGGGGTGGCAGGTCCTTCAGGGGCTGGGAAGACTGTGTTTACTGAAAAGATACTTGGCTTCATGCCCAGCATTACAGTCATTTCGATGGACAATTACAATGATTCTAGTCGAATTGTTGATGGAAACTTTGATGATCCTCGGTTAACAGATTATGACACATTGCTCCAAAACCTACAAGATCTAAAGGATGGAAAGCCAGTTCAGGTTCCCATATATGATTTCAAGTCCAGCTCACGTACAGGATACAGGACAGTAGAACCGCCAAACTCCAGAATTGTAATTATAGAGGGCATCTATGCCTTGAGTGAGAAGCTGCGACCTCTACTAGACCTTCGAGTATCTGTTACAGGTGGAGTTCACCTTGACCTTGTAAAGCGAGTTATACGTGACATACAACGGGCTGGTCAAGAACCTGAAGAAATCATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCATTTATTGAGCCAGATCTCCAGACAGCACATATAAAAATCATCAACAAATTCAACCCATTTACTGGATTCCAGAGTCCTACTTATATATTGAAGTCAGCAAGGAAGGTAGATCCGGATCAAATTAAGGCTGTTCTATCTGAAGATTTTAATGAAACCACAGAGCAGACTTATGACATATATCTTTTACCACCTGGTGAAGATCCAGAAACTTGCCAATCATATTTAAGGATGCGAAATAAGGAGGGGAAATACAGTCTCATGTTTGAGGAGTGGGTGACTGATAATCCATTTGTAATTTCACCAAGAATTACTTTTGAGGTCAGCGTGCGACTTCTTGGTGGATTAATGGCTCTGGGATACACGATAGCCACTATCCTTAAGAGAAACAGCCATGTCTTTTCTGATGATAGGGTTTGTGTGAAACTAGATTGGCTTGAGCAGCTAAATCGACATTATGTTCAGGTGCAAGGAAGAGATCGCTTAGTTATACAATACATAGGACAACAGCTGGGTCTGGAAGGCTCCTACATTCCTCGGACCTACATCGAGCAAATTCAACTTGAAAAGCTTGTAAACGAAGTTATGGCCCTACCAGATGATTTAAAGACAAAGCTCAGCCTAGATGAGGATTTGGTTTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCAGATAGGGTTGCATTGAGAAATAAATACATGAGAAGTGGAATGTCACAGTCATATACAAATCAAAGGGACAAAAATTTAGCCAAAGTTACTGGATATGCTGCTAAAAACCGAGGTTTTGGTGAAAGAAATTCCGATTCTTCAACAACTGCAACTCAGGGAGCCATCAACCAGCTTTCGAATCAAATTTCTGCCCTCAATGATAGAATGGATGACTTTACAAGTCGTATTGAAGAGCTGAATACCAAGTTAACCATCAAGAAAAGTTCCCCAAGCCAACAAAATATGTCGCTTCAGGCTGAGGCCTGCAGTGGTTCTGCTCCCACCTCATACTTTATCACTAGTTTGGGAAATGGTTCCCTAACTGGATCTAAATTGACTAATTCCTCATCTTCATCACAATTAGCTAAAGATTCTCCTTTACTAGATGAGATATCAGGTATAGCACGCAGTCAGCGTCAGATCATGCACCAATTGGACAACCTCAATAATCTTCTCCGGGGGAGCTTGGGTGAAAAGTCTCATCAAACAAGAACCAGCAGCAGGAAGAGCATCGCTGGTGATTCAGATTCCACTGGAACTCGTGTTATGGCTGCAGTGACGGTTGGTTGTTTGGGGATATTCTTGATGAAGGGGTTATTGACCAGGAAATGA 1992 0.4137 MANDTSGADSHHKRLGLLKDQVHLVKRKDSDRYEVASIQDQLSFEKGFFIVIRACQMLAQKNDGIILVGVAGPSGAGKTVFTEKILGFMPSITVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLQDLKDGKPVQVPIYDFKSSSRTGYRTVEPPNSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSARKVDPDQIKAVLSEDFNETTEQTYDIYLLPPGEDPETCQSYLRMRNKEGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVIQYIGQQLGLEGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVALRNKYMRSGMSQSYTNQRDKNLAKVTGYAAKNRGFGERNSDSSTTATQGAINQLSNQISALNDRMDDFTSRIEELNTKLTIKKSSPSQQNMSLQAEACSGSAPTSYFITSLGNGSLTGSKLTNSSSSSQLAKDSPLLDEISGIARSQRQIMHQLDNLNNLLRGSLGEKSHQTRTSSRKSIAGDSDSTGTRVMAAVTVGCLGIFLMKGLLTRK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04112 663 Gene3D - 66 245 IPR027417 -
Arst5g04112 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 236 IPR027417 -
Arst5g04112 663 Coils Coil 502 529 - -
Arst5g04112 663 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Arst5g04112 663 Pfam CYTH domain 269 404 IPR023577 -
Arst5g04112 663 CDD UMPK_like 67 239 - -
Arst5g04112 663 Gene3D - 257 412 - -
Arst5g04112 663 PRINTS Uridine kinase signature 132 147 - -
Arst5g04112 663 PRINTS Uridine kinase signature 65 82 - -
Arst5g04112 663 PRINTS Uridine kinase signature 188 198 - -
Arst5g04112 663 PRINTS Uridine kinase signature 224 237 - -
Arst5g04112 663 SUPERFAMILY CYTH-like phosphatases 259 407 IPR033469 -
Arst5g04112 663 PANTHER URIDINE KINASE 16 423 - -
Arst5g04112 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04112 Arst-Chr5 102846216 102855429 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04112 66 236 PRT Gene Family AT4G26510 28.333 1.45e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04112 K00876 - gmx:100781286 1150.19