Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04088 ATGAGGAAGGGTACTACTAGAAAATTAAGAAATCTACGTCTGAGCAAGATCTACACTTTCGCATGTGGTAAGAAATCATTACTGAATGAAGAACATTCTCGAATTGGAAGTCCTGGCTTTTCAAGGGTGGTTGTATTGAATGAGGCTTCAGAGAGCTCTGAGAATGCTTCTGGGAACAACAATAACAACCAGCAGTATGCAGATAATGTTGTGAGATCCACAAAGTATACTGTTGCAAATTTCTTACCCAAGTCACTATTTGAGCAGTTTAGGAGAGTTGCAAACTTCTTTTTCTTGGTCACTGGTGTATTGTCCTTTACCAAGCTTGCGCCTTATACAGCTGTCAGTGCCATTCTGCCCTTGATTGTTGTCATTACTGCAACAATGGTCAAAGAAGGTATTGAAGATATGCGTCGCAAAAAGCAGGATATTGAGGTGAACAATAGAATAGTGGAAGTGCATAAAGGGGATGGAGTTTTTGAATGTACTGAGTGGAAGAACCTAAAGGTGGGTGACATAGTTAAGGTTGAAAAGGATGAGTTCTTCCCTGCAGACCTACTACTTCTTTCATCAAGTTATGAGGATGCAGTTTGTTATGTTGAGACCATGAACTTAGATGGAGAAACAAACTTGAAGTTGAAACAAGGCTTGGAAGTAACTTGCTCCTTAACAGAAGACAACTTGAGTGATTTCAGAGCTTCAATCAAATGTGAAGACCCCAATGCAAACTTGTATACATTTGTTGGAAGCATTGAGTTTAAGGAGCAAGTTTATGCACTTTCTCCCCAGCAGCTTCTCCTAAGAGATTCTAAACTGCGCAACACGGACTACATATTTGGAGCTGTCATCTTCACCGGTCATGACACAAAGGTTATCCAAAACTCGGTTTCTCCACCTTCCAAGAGAAGCAAGATCGAGAGGAAGATGGATCGGGTTATCTATTTCATGTTCTTAATCTTGTTCCTAATGGCACTTGTTGGATCAGTTTTCTTTGGCATTGAAACTAAACAGGACTTGAACAATAATGTGATGAAAAGATGGTATCTAAGGCCAGATGATTCTACAATTTTCTTTGATCCGAAAAGAGCACCTGCTGCTGCTTTCTTCCATTGTTTAACAGCCTTAATGTTATACAGCTTCTTTATTCCGATCTCATTGTATGTATCCATCGAAGTTGTTAAGGTCCTTCAGAGCATTTTCATAAACCAAGATATCCTAATGTATCATGAAGAAACAGACAAGCCAGCTCATGCCATTACTTCCAACTTGAATGAGGAACTTGGCCAAGTTCACACAATTCTTTCTGATAAAACTGGAACTCTGACTTGCAATTCAATGGAGTTCATCAAATGTTCTATTGCCGGAGTCGCTTATGGTCGTGGAGTCACAGAGGTGGAGAAGGCCATGAACAGAAGAAATGGTTTAGAATTTGATGACTTAAGAAACTCTCCTGATAGAAAGGCACCAATCAAAGGTTTTAATTTTACAGATGAAAGGATCATGGATGGAAATTGGGTTAATGAGCCTCATGCAAATGTTATCCGGAATTTCTTTCGATTATTGGCAATTTGTCATACAGCTATACCAGAAATTAATGAAGACACAGGAAATATCTCTTATGAAGCTGAATCTCCAGATGAAGCAGCATTCGTCATTGCGGCCAAAGAACTTGGCTTTGAATTCTACAAAAGGACTCAGACTAGTTTATCAATCTTTGAGTTGGATCCTGTTTCTCAAGAAAAAGTTAAAAGGACATACATGCTTCTCCATGTTTTAGAATTCAATAGCACAAGAAAGCGAATGTCAGTCATAGTAAAAGATGAAAAGGGAAGAATTTTGCTACTTTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGACTTGCAAACAATGGAAGAAAGTTTGAAGAGAAAATCTTGGAACATGTACATGAGTATGCCGATGCAGGTTTGAGGACATTGATACTAGCGTTCCGCGAGCTTGATGAAGAAGAATACAAGGAGTTTCAAGATAAATTTACCGAAGCAAAAAATTCAGTTTCAGCAGATCGAGAAACAATGATTGAGGAAGTATCAGATAACATCGAGAGGAATATGATTCTACTTGGTGCCACTGCAATAGAGGACAAGCTCCAACACGGGGTTCCGAATTGCATTGACAAGCTTTCTCAAGCAGGAATTAAAATCTGGGTTTTGACAGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTACTTAGAGAAGGAATGACGCAAATCATAATTCATTTGGATACTCCAGAAATTCGATCACTAGAGAAGGTTGGAGATAAGAGAGAAATTTTCAAGGCTTCAAGAAAAAGTATTCAGCGTCAACTATCACAAGGTGCTCAACAAATTGCAGCTGCTAGTGGAACCCCTGAGCAAGCATTTGCTCTAATTATTGATGGCAAATCACTTACTTATGCTTTAGAGGATGATATGAAGGACTTGCTTCTGGATTTAGCAACTAAATGTGCATCTGTTATTTGTTGTCGCTCATCGCCAAAACAGAAAGCATTGGTGACCAGACTTGTAAAATCTAGAACCGGTAAAACTACGTTAGCTATTGGAGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCGGACATAGGGATTGGAATCAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCCAGTGATGTTGCAATTGCACAGTTTTGTTATTTGGAACGACTACTTCTTGTGCATGGACATTGGTGTTACCGAAGAATCTCATCAATGATATGTTATTTCTTTTACAAGAATATCACATTTGGCTTCACTTTATTCTTGTTTGAGGTCCATGCGTCATTTTCTGGAGAACCTGCATATAATGATTGGTTTTTGTCTCTGTATAATGTCTTTTTTTCGTCACTTCCAGTCATTGCCCTTGGGGTCTTTGACCAGGATGTATCAGCCCGGTTTTGTTTGAGGTTTCCTATGTTGTATCGAGAAGGTGTAGAAAACATCCTCTTTAGCTGGCGTCGAATACTTAGTTGGATGCTTAATGGATTTATTAGCTCCATAATAATTTTCTTCTTCTGCACAAAAGCTATGGAGATTCAAGCCTTTGATGAAGGAGGAAGAACTGCAGGAAGAGATATACTAGGAGCAACAATGTACACTTGTGTGGTTTGGGTAGTAAACCTGCAAATGGCACTTGCTGTAAATTACTTCACCCTGATTCAACATGTTTTAATATGGGGCTCCATTGTTATCTGGTATATCTTCCTCCTTACCTATGGAGCAATGGCCTCATCGTTTTCTGGAAACGCTTACCATGTCTTTGTTGAAACTCTGGCTCCCACTCCATGCTATTGGCTGTTGATATTTTTTGTGGTAATCACAACACTTGTACCATACTTCACTTTCTCAGCACTACAGATGCGATTCTTTCCCATGTATCATGAAATAGTGCAGTGGTTGAGGCACAAAGGAAAGACGAATGATCCCGAGTTTTGCGCTATGGTGCGGCAAAGTTCATTGAGGCCCACAACTGTTGGATCAACGGCACGCAGAGCGGCCAAGACTAACAGCCTTAGAGGCAGCTTCACTGACCATAGATGA 3600 0.3978 MRKGTTRKLRNLRLSKIYTFACGKKSLLNEEHSRIGSPGFSRVVVLNEASESSENASGNNNNNQQYADNVVRSTKYTVANFLPKSLFEQFRRVANFFFLVTGVLSFTKLAPYTAVSAILPLIVVITATMVKEGIEDMRRKKQDIEVNNRIVEVHKGDGVFECTEWKNLKVGDIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTCSLTEDNLSDFRASIKCEDPNANLYTFVGSIEFKEQVYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSVSPPSKRSKIERKMDRVIYFMFLILFLMALVGSVFFGIETKQDLNNNVMKRWYLRPDDSTIFFDPKRAPAAAFFHCLTALMLYSFFIPISLYVSIEVVKVLQSIFINQDILMYHEETDKPAHAITSNLNEELGQVHTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMNRRNGLEFDDLRNSPDRKAPIKGFNFTDERIMDGNWVNEPHANVIRNFFRLLAICHTAIPEINEDTGNISYEAESPDEAAFVIAAKELGFEFYKRTQTSLSIFELDPVSQEKVKRTYMLLHVLEFNSTRKRMSVIVKDEKGRILLLCKGADSVMFERLANNGRKFEEKILEHVHEYADAGLRTLILAFRELDEEEYKEFQDKFTEAKNSVSADRETMIEEVSDNIERNMILLGATAIEDKLQHGVPNCIDKLSQAGIKIWVLTGDKMETAINIGFACSLLREGMTQIIIHLDTPEIRSLEKVGDKREIFKASRKSIQRQLSQGAQQIAAASGTPEQAFALIIDGKSLTYALEDDMKDLLLDLATKCASVICCRSSPKQKALVTRLVKSRTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFCYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLFEVHASFSGEPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARFCLRFPMLYREGVENILFSWRRILSWMLNGFISSIIIFFFCTKAMEIQAFDEGGRTAGRDILGATMYTCVVWVVNLQMALAVNYFTLIQHVLIWGSIVIWYIFLLTYGAMASSFSGNAYHVFVETLAPTPCYWLLIFFVVITTLVPYFTFSALQMRFFPMYHEIVQWLRHKGKTNDPEFCAMVRQSSLRPTTVGSTARRAAKTNSLRGSFTDHR 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04088 1199 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 55 1155 - -
Arst5g04088 1199 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 55 1155 - -
Arst5g04088 1199 SUPERFAMILY Calcium ATPase, transmembrane domain M 62 1144 IPR023298 -
Arst5g04088 1199 SUPERFAMILY HAD-like 422 910 IPR036412 -
Arst5g04088 1199 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Arst5g04088 1199 PRINTS P-type cation-transporting ATPase superfamily signature 434 448 - -
Arst5g04088 1199 FunFam Phospholipid-transporting ATPase 543 701 - -
Arst5g04088 1199 Gene3D - 547 701 IPR023299 GO:0000166
Arst5g04088 1199 Gene3D - 124 295 - -
Arst5g04088 1199 SUPERFAMILY Calcium ATPase, transduction domain A 154 292 IPR008250 -
Arst5g04088 1199 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 705 IPR023299 GO:0000166
Arst5g04088 1199 ProSitePatterns E1-E2 ATPases phosphorylation site. 436 442 IPR018303 -
Arst5g04088 1199 Gene3D - 702 904 IPR023214 -
Arst5g04088 1199 FunFam Phospholipid-transporting ATPase 701 906 - -
Arst5g04088 1199 SFLD p-type atpase 416 917 IPR044492 -
Arst5g04088 1199 SFLD p-type atpase 416 917 IPR044492 -
Arst5g04088 1199 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1144 IPR032630 -
Arst5g04088 1199 Pfam Cation transport ATPase (P-type) 539 626 - -
Arst5g04088 1199 CDD P-type_ATPase_APLT_Dnf-like 68 1015 - -
Arst5g04088 1199 NCBIfam HAD-IC family P-type ATPase 838 945 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst5g04088 1199 Pfam Phospholipid-translocating ATPase N-terminal 60 117 IPR032631 -
Arst5g04088 1199 FunFam Phospholipid-transporting ATPase 127 296 - -
Arst5g04088 1199 NCBIfam phospholipid-translocating P-type ATPase 66 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Arst5g04088 1199 NCBIfam phospholipid-translocating P-type ATPase 66 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Arst5g04088 1199 SFLD C1.7: P-type atpase like 416 917 - -
Arst5g04088 1199 SFLD C1.7: P-type atpase like 416 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04088 Arst-Chr5 102498497 102507233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04088 4 1194 Primary Pumps ATPases AT1G68710 69.976 0.0 1789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04088 K01530 - gmx:100785037 1910.19