Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04051 ATGGCAGGAGCATCATGGTTGGTGGACAAAAGCAGAATTGCAACCAAAATCAAGAGTGCATCAGGAGCTTGTGATCCTAACGAAGTTATTTGGAAAACCAATCCTACCAGGATTTGCCCGAATTGTCATCATCCTATTGACAATAGTGATAAAATTGCATATTACCAGTTTAAGCGTTGGTTCAAAGGACCGGTATTGCTTGATATTCATGTAACTCAAGAGTGGCCTGGCTTACCAAAAGGGGTTAAATTTGATCCGTCAGATCAAGAGATAATCTGGCACTTGCTTGTAAAGGCTGGTGTAGGAAATTTAAAACCTCATCCTTTCATTGATGAGTTTATTACTACCCTTGAAGTGGATGATGGGATTTGTTATACTCATCCTCAACATTTACCTGGTGTCAAGCAAGACGGAAGGGCCTCACATTTCTTCCACAGAGCAATAAAGGCTTATAATACCGGCACGCGAAAGCGTCGAAAAGTACATGGTCAGGATGACGTTCGTTGGCACAAGACTGGAAGGACTAAACTGATCACCCTGAACGGGGTTCCAAAGGGTTGCAAAAAAATCATGGTTTTGTATACAAATGCGGTGAGAGGAGGAAAGTCGGTGAAAACTAATTGGGTTATGCACCAATATCACCTTGGGACAGAAGAAGATGAAAAGGAAGGAGCATATGTTATTTCTAAAGTGTTTTATAAAGATGACCAGGATATACCTGAAGCCGCAGAAAGTAAAAATGCAACAGTTGCGAAAGTAGATCCAGTCACTCCCAAATCCACGACTCCTGAACCTCCTCGTAATGAAAGGCAAGATTCAGATCTAGGCCTGGATCTAGACCTAGGGCAAGAAGCACTTGCTTTTACTGAGATGGATTGCTTAGATGAAATTCAAGCTGACTGTGAAGAATCTGCGAAAGCTAATCCACCAGTACTGGAGACACAAGAAAATGAAGGGATGGACAACAAGGAAACTAATGCTTATGAAGCACAACCGTGGTGGGATAGTGATTCACAGAATCTATTAGATTCACAACAACTCGTTGAAGCATTAACTCTCTGCGAAGATATATTTCACAGCCAATCTTCCAACAAAGACGATGAAAATGATAAGAACCAAACCGGTCTATCGGTGTATGCTCATCTAGGACCAGAGCATCTGAAGAAGGATATTGAGGAGTGTCAAAAGCTTGCTCCTGCAGGACCAGAGCATCAGAAGGATATTGAAGACGGCCAAAATCTTGACATCGACCTTGCAAATATAGAGCGGGATACTCCTCCTGAGCATCGACTAAGTCAGCTGGAATTTGGTTCGCAGGACAGCTATACTTACTGGGGTTTTCAAGGCGTAAACTAA 1356 0.424 MAGASWLVDKSRIATKIKSASGACDPNEVIWKTNPTRICPNCHHPIDNSDKIAYYQFKRWFKGPVLLDIHVTQEWPGLPKGVKFDPSDQEIIWHLLVKAGVGNLKPHPFIDEFITTLEVDDGICYTHPQHLPGVKQDGRASHFFHRAIKAYNTGTRKRRKVHGQDDVRWHKTGRTKLITLNGVPKGCKKIMVLYTNAVRGGKSVKTNWVMHQYHLGTEEDEKEGAYVISKVFYKDDQDIPEAAESKNATVAKVDPVTPKSTTPEPPRNERQDSDLGLDLDLGQEALAFTEMDCLDEIQADCEESAKANPPVLETQENEGMDNKETNAYEAQPWWDSDSQNLLDSQQLVEALTLCEDIFHSQSSNKDDENDKNQTGLSVYAHLGPEHLKKDIEECQKLAPAGPEHQKDIEDGQNLDIDLANIERDTPPEHRLSQLEFGSQDSYTYWGFQGVN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04051 451 ProSiteProfiles NAC domain profile. 78 234 IPR003441 GO:0003677|GO:0006355
Arst5g04051 451 FunFam NAC domain-containing protein 8 87 238 - -
Arst5g04051 451 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 395 IPR044799 GO:0003700
Arst5g04051 451 SUPERFAMILY NAC domain 69 234 IPR036093 GO:0003677|GO:0006355
Arst5g04051 451 Pfam No apical meristem (NAM) protein 79 215 IPR003441 GO:0003677|GO:0006355
Arst5g04051 451 MobiDBLite consensus disorder prediction 243 276 - -
Arst5g04051 451 Gene3D NAC domain 87 238 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04051 Arst-Chr5 102021056 102025550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04051 14 234 NAC Transcription Factor Family AT1G28470 48.458 2.67e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst5g04051 NAM 1.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04051 - - adu:107491284 887.486