Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04049 ATGGCCACTGTAGCAACAAGTGGAATAGGAGCAGGGTTAACAAAGCTCCAAGCAAACAAAGCAAAGCACAACAAATCCCTCTTTCTGGGCCATGGATTCAGAATCAAACCTTCTTCTCTACCATGCAGCAGTAGAAAGCAGCCTCCTTTTCAAGTGTTTGCATTAGGTGGTGGTGGTGGTGGAAGTGAATGGGTTCTTGATTCCATTCACAACCTCTTTGTGGGTGTTGGGGTTGGTCTCCCTTGCACTGTGATGGAGTGTGGGGACATAATTTATAGGAGCACACTACCAAAGTCAAATGGGTTGACTCTTACAGTTCCTGGTGCGGTTCTTGCTTTGAGTGCTCTCTCTTACCTTTGGGCCACACCTGGGGTTGCACCTGGTTTCTTTGACATGTTTGTTCTTGCTTTTGTTGAGAGATTGTTCAGACCCACTTATAGAAAGGATGACTTTGTTGTGGGCAAGAAGTTAGGAGAGGGATCCTTTGGAGTAGTTTATAGAGCAACACCGTCCAAGCCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAAGCTACTGAATATGGTGCCGTAGAAATTTGGATGAATGAGCGTGTACGGAGAGCTTGTGCAAGCAGCTGCGCAGATTTTCTATACGGGTTTCTTGAGAGCTCTTCAAAGAAAGCTCCTGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCTACCCTAGCTGACTTGCTGCAGAGTAGAGAATTTCCATACAATGTTGAAACATTAATTCTGGGTGAGGTTCAGGACTTGCCGAAGGGAGTTGAAAGAGAAAACAGAATTATTCAAACAATCATGAGGCAACTGTTGTTTGCATTAGACGGTCTTCATTCAACTGGCATTGTGCATAGGGATATTAAGCCACAGAACATTATTTTTTCTGAAGGGTCGCGAACATTCAAAATCATTGATCTTGGAGCTGCTGCAGATCTGCGAGTTGGCATTAACTATATTCCCAAGGAGTTTCTCTTGGATCCAAGATATGCCGCACCAGAGCAATACATCATGAGCACACAAACTCCATCTGCACCCTCGGCTCCTGTAGCAACTGCACTCTCACCGGTTTTATGGCAGTTGAATTTGCCCGACAGATTTGATATCTATAGTGCTGGTCTGATCTTTCTTCAAATGGCATTCCCGGGTTTACGCACCGATAATGGCCTTATACAATTCAACCGTCAATTAAAGAGGTGCGACTATGACTTGGTTACTTGGAGAAAAAGCGTAGAGCCTCGATGTGGCCCTGAACTTAGGAGGGGCTTTGATTTGTTGGATTTAGATGGTGGAATAGGATGGGAACTTCTGACATCAATGGTTAGATACAAAGCAAGGCAAAGGCTGAGTGCAAAAGCCGCATTGACTCATCCTTTCTTCGATAGAGAAGGTTTGTTGGCACTGTCTTTCATGCAAAATCTGAGGCTGCAGCTCTTACGAGCGACTCAGCAGGATTACGGAGAAGCTGCCAAGTGGGTCACTGAACTAATGGCAAAATCAGGAACTGAGAAGGATGGTGGATTCACTGAAGCTCAGCTCCTTGAACTAAAAGAAATTGAACCCAAGAAGAAGAAGAAGGCTAATGCACAGAGAAACGCTCTAGCTTCTGCACTTAAACTTCAGAGGAAAATCATTAAAACCTTAAATGAGAGTATGGATGAGCTCAGCAGACGAAGGAAAAGCATTTGGTGGAGCAGGTGGATCCCAAGAGAGGAATGA 1743 0.4475 MATVATSGIGAGLTKLQANKAKHNKSLFLGHGFRIKPSSLPCSSRKQPPFQVFALGGGGGGSEWVLDSIHNLFVGVGVGLPCTVMECGDIIYRSTLPKSNGLTLTVPGAVLALSALSYLWATPGVAPGFFDMFVLAFVERLFRPTYRKDDFVVGKKLGEGSFGVVYRATPSKPSSKEGDLVLKKATEYGAVEIWMNERVRRACASSCADFLYGFLESSSKKAPEYWLIWRFEGDATLADLLQSREFPYNVETLILGEVQDLPKGVERENRIIQTIMRQLLFALDGLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRTDNGLIQFNRQLKRCDYDLVTWRKSVEPRCGPELRRGFDLLDLDGGIGWELLTSMVRYKARQRLSAKAALTHPFFDREGLLALSFMQNLRLQLLRATQQDYGEAAKWVTELMAKSGTEKDGGFTEAQLLELKEIEPKKKKKANAQRNALASALKLQRKIIKTLNESMDELSRRRKSIWWSRWIPREE 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04049 580 CDD STKc_SNT7_plant 155 468 - -
Arst5g04049 580 SUPERFAMILY Protein kinase-like (PK-like) 145 471 IPR011009 -
Arst5g04049 580 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Arst5g04049 580 Gene3D Phosphorylase Kinase; domain 1 137 230 - -
Arst5g04049 580 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 62 555 - -
Arst5g04049 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Arst5g04049 580 SMART serkin_6 151 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04049 580 ProSiteProfiles Protein kinase domain profile. 151 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04049 580 FunFam Serine/threonine-protein kinase STN7, chloroplastic 259 473 - -
Arst5g04049 580 Coils Coil 546 566 - -
Arst5g04049 580 Pfam Protein kinase domain 152 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g04049 580 Gene3D Transferase(Phosphotransferase) domain 1 259 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04049 Arst-Chr5 102013063 102018885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04049 268 469 Core Cell Cycle Gene Families AT2G38620 31.163 4.27e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Arst5g04049 Pkinase 1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04049 - - gmx:100778588 899.042