Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04030 ATGAGACCAGAAGGAAATCCATTAGACCTTAACAATTTGCCTGATGACTACAATAGAGATCATGGCAAACAACTCCTCCAAGACACCTTCTCTCCCGGTTGCAGGAAAAAGAAAAGCGGCGGCGGTAAGGATGGAAAAGAGGAGTGTGGGAAGGTGTATGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCCCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACAGAGACGCTGAATCATGCCCGTCAGCTGGTGTTTGCTGCTCATCAACCTCCACCTCACTTAGGATGCTGTCAAGACCCAAGATACTTCTCTGCGTCATCCACGTCATCAACCGCTTCAGCATCTCATCATCAGCCCTATCTATACGCTTCACCATCCAGGCCACCGCCGGTCTCCTTCGCTCCTCCTCCTCAGGATTACTACGTGGGCCATGTCCTCAGCACCAACTATGGCGGTGCGGCAGAGTCATCAGCAGGAGCAGGAGGAGGCAGTTACACGTGCATAGGTGCAGCGGTGGTGGGACAAGCAGGGAAGGAGAGGGAGCAGGAAGGGTCGTTGAATTGGGGAAGATCATCATCAACATCGGGATCACAGCCTCATCATCGTTTGGATCCTCCTTCAGCGATCAATCGGTTTCAAGATGGGTTCTAA 672 0.5223 MRPEGNPLDLNNLPDDYNRDHGKQLLQDTFSPGCRKKKSGGGKDGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFAAHQPPPHLGCCQDPRYFSASSTSSTASASHHQPYLYASPSRPPPVSFAPPPQDYYVGHVLSTNYGGAAESSAGAGGGSYTCIGAAVVGQAGKEREQEGSLNWGRSSSTSGSQPHHRLDPPSAINRFQDGF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04030 223 FunFam Zinc finger protein STAMENLESS 1 28 101 - -
Arst5g04030 223 SUPERFAMILY beta-beta-alpha zinc fingers 51 81 IPR036236 -
Arst5g04030 223 MobiDBLite consensus disorder prediction 185 223 - -
Arst5g04030 223 MobiDBLite consensus disorder prediction 1 47 - -
Arst5g04030 223 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Arst5g04030 223 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Arst5g04030 223 Gene3D Classic Zinc Finger 36 97 - -
Arst5g04030 223 PANTHER ZINC FINGER PROTEIN JAGGED 36 210 IPR045320 GO:0003700
Arst5g04030 223 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04030 Arst-Chr5 101675875 101677290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04030 4 181 C2H2 Transcription Factor Family AT1G13400 42.079 6.19e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst5g04030 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04030 - - aip:107616790 385.956