Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04026 ATGTTTAACATGAAGTCCAACAATGTAGCTGTTTCTGTTGCTGGCACTAACTTGCAGTATGGGACGTTGACCACGACGAACCTTGGGAGTGCAGAGGTTGGTGGTTCAAGTGGGGGTGGGTGCCTGGATACAGGGATAAACATGTACCAGCAAAAAGGGATGGCTATGCCAAACATGCCTTTAGGAAATGGTCATGTTGAGAATTGGGGTGATTCAGGCATGGCTGACAACAGCCAACAGACTGATGATACTTCCACAGATATTGACATCGATGACAGAAATCAATGCAATAGAGTTCAGCATGGGGCACCCACGGTTGTGGACTCGAAGGATGAGACAAAGATCAAAGCTGTTGACCAGAAGACTATGCGGAGGCTTGCTCAAAATCGAGAGGCAGCAAGGAAAAGTCGGTTAAGAAAAAAGGCATATGTACAGCAGCTGGAGAACAGCCGAGCCAAACTCTTACAATTGGAGCAAGAGCTTCAGCGAGCACGTCAGCAGGGTATATTTATTGCAACTAACGGGGATCATACTCATTCATCTCTTGGAAATGGGGCCTTAGCATTTGATATGGAGTATGCCCGGTGGGTTGATGAGCAACAACATTTGCTAAATGACCTTAGATCAGCCTTAAATTCTCAAATGGGAGATAATGAACTGCATCTTCTTGTTGATGGTGTCATGGCACATTATGACGAATTATTTCGGTTAAAGAGCATAGGAGCAAAGGCTGATGTCTTTCACATGCTCTATGGGATGTGGAAGACACCTGCCGAAAGGTGGCTGATGTGGCTCGGCGGATTCCGGTCGTCTGAACTTCTCAAGATAGTTAAGAACCACCTCGAGCCCTTAACAGAACAGCAGTTGTTGGGGATTTGTAATCTTCAGCAGTCTTCTCATCAGGCAGAGGATGCTTTGAATCAAGGTATGGAGGCGTTGCAACAATCTCTTTCGGACACACTTTCCTCGGCCGCCCTAGGACCCACCGGTGCCGGAAATGTTGCCGATTATATGAGCCAAATGGCAATTGCAATGGGTAAGATTGCCAATCTGGAGAGTTTCCTTCATCAGGCTGATGTATTGAAGCAAGAAATGCTGCAGCAGTTGCAACGAATTTTGACCACACGACAAATTGCACGAGCCCTCCTTGTAATGAATGATTACATTTCAAGACTAAGAGCACTCAACTCATTATGGAACTCAATGATGAGTTGCAGCGACTCTCAAGTTTAG 1233 0.4599 MFNMKSNNVAVSVAGTNLQYGTLTTTNLGSAEVGGSSGGGCLDTGINMYQQKGMAMPNMPLGNGHVENWGDSGMADNSQQTDDTSTDIDIDDRNQCNRVQHGAPTVVDSKDETKIKAVDQKTMRRLAQNREAARKSRLRKKAYVQQLENSRAKLLQLEQELQRARQQGIFIATNGDHTHSSLGNGALAFDMEYARWVDEQQHLLNDLRSALNSQMGDNELHLLVDGVMAHYDELFRLKSIGAKADVFHMLYGMWKTPAERWLMWLGGFRSSELLKIVKNHLEPLTEQQLLGICNLQQSSHQAEDALNQGMEALQQSLSDTLSSAALGPTGAGNVADYMSQMAIAMGKIANLESFLHQADVLKQEMLQQLQRILTTRQIARALLVMNDYISRLRALNSLWNSMMSCSDSQV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04026 410 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 119 163 IPR004827 GO:0003700|GO:0006355
Arst5g04026 410 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 124 139 IPR004827 GO:0003700|GO:0006355
Arst5g04026 410 Coils Coil 140 167 - -
Arst5g04026 410 CDD bZIP_HBP1b-like 121 173 - -
Arst5g04026 410 SMART brlzneu 117 195 IPR004827 GO:0003700|GO:0006355
Arst5g04026 410 Gene3D - 120 169 - -
Arst5g04026 410 SUPERFAMILY Leucine zipper domain 121 164 IPR046347 GO:0003700|GO:0006355
Arst5g04026 410 PANTHER TRANSCRIPTION FACTOR TGA9 63 401 - -
Arst5g04026 410 Pfam Seed dormancy control 204 278 IPR025422 GO:0006351|GO:0043565
Arst5g04026 410 ProSiteProfiles DOG1 domain profile. 186 402 IPR025422 GO:0006351|GO:0043565
Arst5g04026 410 FunFam BZIP family transcription factor 120 169 - -
Arst5g04026 410 Pfam bZIP transcription factor 121 159 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04026 Arst-Chr5 101609961 101616005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04026 11 399 bZIP Transcription Factor Family AT1G68640 59.750 5.64e-153 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst5g04026 DOG1 1.5e-28 No_clan