Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04024 ATGCAAAGCTTCAAGACAGCTCAAACAAGCTCCCAACTGTATTGTCATTCTCCCTTCTTGCTTCGGGGAGACAATAATACCAACCGGAACCCAACACGTTTCTCTGATCTTGGCGAGATTCAACATTCTGCACCTGTGTTTCATCATGAAGATGCTGTTGATTTAAGCTCAAGCTCAATGTTTAACATGAAGTCCAACAATGTAGCTGTTTCTGTTGCTGGCACTAACTTGCAGTATGGGACGTTGACCACGACGAACCTTGGGAGTGCAGAGGTTGGTGGTTCAAGTGGGGGTGGGTGCCTGGATACAGGGATAAACATGTACCAGCAAAAAGGGATGGCTATGCCAAACATGCCTTTAGGAAATGGTCATGTTGAGAATTGGGGTGATTCAGGCATGGCTGACAACAGCCAACAGACTGATGATACTTCCACAGATATTGACATCGATGACAGAAATCAATGCAATAGAGTTCAGCATGGGGCACCCACGGTTGTGGACTCGAAGGATGAGACAAAGATCAAAGCTGTTGACCAGAAGACTATGCGGAGGCTTGCTCAAAATCGAGAGGCAGCAAGGAAAAGTCGGTTAAGAAAAAAGGCATATGTACAGCAGCTGGAGAACAGCCGAGCCAAACTCTTACAATTGGAGCAAGAGCTTCAGCGAGCACGTCAGCAGGGTATATTTATTGCAACTAACGGGGATCATACTCATTCATCTCTTGGAAATGGGGCCTTAGCATTTGATATGGAGTATGCCCGGTGGGTTGATGAGCAACAACATTTGCTAAATGACCTTAGATCAGCCTTAAATTCTCAAATGGGAGATAATGAACTGCATCTTCTTGTTGATGGTGTCATGGCACATTATGACGAATTATTTCGGTTAAAGAGCATAGGAGCAAAGGCTGATGTCTTTCACATGCTCTATGGGATGTGGAAGACACCTGCCGAAAGGTGGCTGATGTGGCTCGGCGGATTCCGGTCGTCTGAACTTCTCAAGATAGTTAAGAACCACCTCGAGCCCTTAACAGAACAGCAGTTGTTGGGGATTTGTAATCTTCAGCAGTCTTCTCATCAGGCAGAGGATGCTTTGAATCAAGGTATGGAGGCGTTGCAACAATCTCTTTCGGACACACTTTCCTCGGCCGCCCTAGGACCCACCGGTGCCGGAAATGTTGCCGATTATATGAGCCAAATGGCAATTGCAATGGGTAAGATTGCCAATCTGGAGAGTTTCCTTCATCAGGCTGATGTATTGAAGCAAGAAATGCTGCAGCAGTTGCAACGAATTTTGACCACACGACAAATTGCACGAGCCCTCCTTGTAATGAATGATTACATTTCAAGACTAAGAGCACTCAACTCATTATGGAACTCAATGATGAGTTGCAGCGACTCTCAAGTTTAG 1410 0.4574 MQSFKTAQTSSQLYCHSPFLLRGDNNTNRNPTRFSDLGEIQHSAPVFHHEDAVDLSSSSMFNMKSNNVAVSVAGTNLQYGTLTTTNLGSAEVGGSSGGGCLDTGINMYQQKGMAMPNMPLGNGHVENWGDSGMADNSQQTDDTSTDIDIDDRNQCNRVQHGAPTVVDSKDETKIKAVDQKTMRRLAQNREAARKSRLRKKAYVQQLENSRAKLLQLEQELQRARQQGIFIATNGDHTHSSLGNGALAFDMEYARWVDEQQHLLNDLRSALNSQMGDNELHLLVDGVMAHYDELFRLKSIGAKADVFHMLYGMWKTPAERWLMWLGGFRSSELLKIVKNHLEPLTEQQLLGICNLQQSSHQAEDALNQGMEALQQSLSDTLSSAALGPTGAGNVADYMSQMAIAMGKIANLESFLHQADVLKQEMLQQLQRILTTRQIARALLVMNDYISRLRALNSLWNSMMSCSDSQV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04024 469 Coils Coil 199 226 - -
Arst5g04024 469 SMART brlzneu 176 254 IPR004827 GO:0003700|GO:0006355
Arst5g04024 469 PANTHER TRANSCRIPTION FACTOR TGA9 115 460 - -
Arst5g04024 469 SUPERFAMILY Leucine zipper domain 180 223 IPR046347 GO:0003700|GO:0006355
Arst5g04024 469 Gene3D - 179 228 - -
Arst5g04024 469 FunFam BZIP family transcription factor 179 228 - -
Arst5g04024 469 Pfam bZIP transcription factor 180 218 IPR004827 GO:0003700|GO:0006355
Arst5g04024 469 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 222 IPR004827 GO:0003700|GO:0006355
Arst5g04024 469 ProSiteProfiles DOG1 domain profile. 245 461 IPR025422 GO:0006351|GO:0043565
Arst5g04024 469 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Arst5g04024 469 CDD bZIP_HBP1b-like 180 232 - -
Arst5g04024 469 Pfam Seed dormancy control 263 337 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04024 Arst-Chr5 101609960 101616005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04024 3 458 bZIP Transcription Factor Family AT1G68640 55.460 2.19e-161 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst5g04024 DOG1 1.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04024 K14431 - gmx:100797393 644.81