Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03989 ATGGAGGCTCAACTCCATGACCACACTAAACGACAAAATCCTCTAAAGCTTTTCGGCTTCAGTGTTGACCACGATGACGATGACCTTTCAACGCTCTTCGACGCCGTCTCCCCGTCCGTCTCACCTGAATCTGACGGCAGAGACGGAGGCGCGTCGGTGTTCCCTCCCTCCTCTTCCTCCTCCGGCGAAAGGAAGTACGAGTGCCAGTACTGCTGCCGCGAGTTCGCAAACTCGCAGGCTCTTGGAGGGCACCAGAACGCGCACAAGAAAGAGCGCCAACAGCTCAAGCGCGCGCAGCTCCAAGCAACGCGAAACGCCGCCGTTTCATTCGTTCGAAACCCGATCGTCTCCGCCTTCGTTCCGCCTCCTCAGCTTCTTGCCCCGCCGGGATCAGTTGTAGGCCAGTCGGGACCTCATCACCCATGGATCTACATGCCGCCACGTGCTGCGCCTCCTCCTTTCCACGCGTCCGTTTCTCACGGCTGCGTCTTCCCCAACAGCAATAGCAACGGAAATTTTAGTAGCTGTAACGGTAGTGGTGGAGGTGGGAATTATAGCGCTATAACGGGTGCAGGGGTGTTGCCTTACGCTGGTGGAGTAGGGGAATCCTCGCCCCCATCTGCCAAGATGGGCTCGCAAGTACAAGCCCGGGCCCACTATGTTAGGATTGATGGGCCTTCTTTGGATAGGTTATCGTCCAAAGGGGATAGAGGGACAAATTTGGATGATGGGTTAGGGTTGGACTTGCAGCTTGGTCTTGGCCCACCTTGA 771 0.5681 MEAQLHDHTKRQNPLKLFGFSVDHDDDDLSTLFDAVSPSVSPESDGRDGGASVFPPSSSSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIVSAFVPPPQLLAPPGSVVGQSGPHHPWIYMPPRAAPPPFHASVSHGCVFPNSNSNGNFSSCNGSGGGGNYSAITGAGVLPYAGGVGESSPPSAKMGSQVQARAHYVRIDGPSLDRLSSKGDRGTNLDDGLGLDLQLGLGPP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03989 256 Gene3D Classic Zinc Finger 51 113 - -
Arst5g03989 256 MobiDBLite consensus disorder prediction 224 256 - -
Arst5g03989 256 SUPERFAMILY beta-beta-alpha zinc fingers 62 93 IPR036236 -
Arst5g03989 256 MobiDBLite consensus disorder prediction 33 63 - -
Arst5g03989 256 FunFam Zinc finger protein 6 56 116 - -
Arst5g03989 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Arst5g03989 256 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Arst5g03989 256 PANTHER ZINC FINGER PROTEIN 5 9 255 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03989 Arst-Chr5 101240219 101241284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03989 15 255 C2H2 Transcription Factor Family AT1G68360 44.747 9.74e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03989 - - tpra:123911684 244.973