Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03988 ATGAGCCTGAAGAATATAGTAAGAAATGAAGGTGTTAGGGGAATGTACCGTGGGCTTTCGCCAACAATACTGGCTTTACTACCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAACTAAAGGGACTGCTTCGTTCACAGGATGGTAGCAATGAACTCACAACTATTAGAAACATTATAGCTGCTGCTGGTGCTGGGGCAGCAACAGCGATTTCTACAAACCCATTGTGGGTTGTTAAGACAAGACTCCAAACACAAGGAATGAGGCCGAATGTTGTTCCTTACAAAAGTGTTCTGTCTGCTTTGACAAGGATTACCCGTGAAGAAGGCTTGCGAGGACTATATAGTGGCATTATGCCTTCATTGGCTGGTGTAAGTCATGTTGCAATTCAATTCCCAGCATATGAAAGTATCAAGTCATACATGGCAAAAAAAGATAATACAACTGTTGACAAGCTTAGTCCTGGAAGTGTTGCCATTGCATCATCAATTTCAAAAGTACTTGCCTCCGTAATGACTTATCCGCATGAGGTGATACGATCAAGGCTGCAAGAGCAAGGCCAGGCCAAAAACATGGGGGTCCATTACGAAGGGGTTATAGATTGTACTAAGAAGGTTTTCCATAAAGAAGGCATTCCGGGTTTTTATCGCGGTTGCGCAACCAATCTGTTACGAACAACTCCATCTGCTGTTATTACCTTCACCAGTTACGAGATGATACATCGGTTCTTGTTGCGGGTTATACCGGAGAACAAGGGTTATCCGCAAAGCTGTCCGAAACCCAAGGCACTTAACAAGCCCCAGGAAGAAGGAAGTAACATCATTAAGAATGACTCCTCTGATATGGGGCCATCACCATCTCAGTCTAACAAGACAGGCTCATCAATTCCTTTGGGAAACAAATAG 906 0.436 MSLKNIVRNEGVRGMYRGLSPTILALLPNWAVYFTVYEQLKGLLRSQDGSNELTTIRNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPNVVPYKSVLSALTRITREEGLRGLYSGIMPSLAGVSHVAIQFPAYESIKSYMAKKDNTTVDKLSPGSVAIASSISKVLASVMTYPHEVIRSRLQEQGQAKNMGVHYEGVIDCTKKVFHKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRVIPENKGYPQSCPKPKALNKPQEEGSNIIKNDSSDMGPSPSQSNKTGSSIPLGNK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03988 301 SUPERFAMILY Mitochondrial carrier 3 239 IPR023395 -
Arst5g03988 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 243 IPR018108 -
Arst5g03988 301 MobiDBLite consensus disorder prediction 270 301 - -
Arst5g03988 301 MobiDBLite consensus disorder prediction 256 301 - -
Arst5g03988 301 Gene3D Mitochondrial carrier domain 1 247 IPR023395 -
Arst5g03988 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 43 IPR018108 -
Arst5g03988 301 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 1 244 - -
Arst5g03988 301 Pfam Mitochondrial carrier protein 3 45 IPR018108 -
Arst5g03988 301 Pfam Mitochondrial carrier protein 52 145 IPR018108 -
Arst5g03988 301 Pfam Mitochondrial carrier protein 153 245 IPR018108 -
Arst5g03988 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 53 141 IPR018108 -
Arst5g03988 301 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 2 250 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03988 Arst-Chr5 101201697 101206293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03988 2 301 Chloroplast and Mitochondria Gene Families AT1G25380 64.821 1.17e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03988 K15115 - gmx:100816376 477.248