Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03987 ATGAGTAGCAATGAACAAACTTCTGGTGCTAGTCACAACGCCAGGGCTTTAATATCCAACGCTGCTGCTGGTGCTTCTGCTGGGGCCATAGCAGCTACGTTTGTGTGTCCGTTGGATGTGATCAAAACAAGGTTACAAGTCCATGGTCTTCCTCCTTCACATCAAGGTAGTGTAATCATCATGAGCCTGAAGAATATAGTAAGAAATGAAGGTGTTAGGGGAATGTACCGTGGGCTTTCGCCAACAATACTGGCTTTACTACCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAACTAAAGGGACTGCTTCGTTCACAGGATGGTAGCAATGAACTCACAACTATTAGAAACATTATAGCTGCTGCTGGTGCTGGGGCAGCAACAGCGATTTCTACAAACCCATTGTGGGTTGTTAAGACAAGACTCCAAACACAAGGAATGAGGCCGAATGTTGTTCCTTACAAAAGTGTTCTGTCTGCTTTGACAAGGATTACCCGTGAAGAAGGCTTGCGAGGACTATATAGTGGCATTATGCCTTCATTGGCTGGTGTAAGTCATGTTGCAATTCAATTCCCAGCATATGAAAGTATCAAGTCATACATGGCAAAAAAAGATAATACAACTGTTGACAAGCTTAGTCCTGGAAGTGTTGCCATTGCATCATCAATTTCAAAAGTACTTGCCTCCGTAATGACTTATCCGCATGAGGTGATACGATCAAGGCTGCAAGAGCAAGGCCAGGCCAAAAACATGGGGGTCCATTACGAAGGGGTTATAGATTGTACTAAGAAGGTTTTCCATAAAGAAGGCATTCCGGGTTTTTATCGCGGTTGCGCAACCAATCTGTTACGAACAACTCCATCTGCTGTTATTACCTTCACCAGTTACGAGATGATACATCGGTTCTTGTTGCGGGTTATACCGGAGAACAAGGGTTATCCGCAAAGCTGTCCGAAACCCAAGGCACTTAACAAGCCCCAGGAAGAAGGAAGTAACATCATTAAGAATGACTCCTCTGATATGGGGCCATCACCATCTCAGTCTAACAAGACAGGCTCATCAATTCCTTTGGGAAACAAATAG 1086 0.442 MSSNEQTSGASHNARALISNAAAGASAGAIAATFVCPLDVIKTRLQVHGLPPSHQGSVIIMSLKNIVRNEGVRGMYRGLSPTILALLPNWAVYFTVYEQLKGLLRSQDGSNELTTIRNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPNVVPYKSVLSALTRITREEGLRGLYSGIMPSLAGVSHVAIQFPAYESIKSYMAKKDNTTVDKLSPGSVAIASSISKVLASVMTYPHEVIRSRLQEQGQAKNMGVHYEGVIDCTKKVFHKEGIPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRVIPENKGYPQSCPKPKALNKPQEEGSNIIKNDSSDMGPSPSQSNKTGSSIPLGNK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03987 361 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Arst5g03987 361 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Arst5g03987 361 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Arst5g03987 361 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Arst5g03987 361 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Arst5g03987 361 SUPERFAMILY Mitochondrial carrier 18 299 IPR023395 -
Arst5g03987 361 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 310 IPR044712 GO:0006862|GO:0055085
Arst5g03987 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Arst5g03987 361 MobiDBLite consensus disorder prediction 316 361 - -
Arst5g03987 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Arst5g03987 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Arst5g03987 361 Pfam Mitochondrial carrier protein 112 205 IPR018108 -
Arst5g03987 361 Pfam Mitochondrial carrier protein 213 305 IPR018108 -
Arst5g03987 361 Pfam Mitochondrial carrier protein 18 105 IPR018108 -
Arst5g03987 361 Gene3D Mitochondrial carrier domain 11 304 IPR023395 -
Arst5g03987 361 MobiDBLite consensus disorder prediction 330 361 - -
Arst5g03987 361 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03987 Arst-Chr5 101201697 101206706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03987 33 361 Chloroplast and Mitochondria Gene Families AT1G25380 65.000 8.69e-148 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03987 K15115 - gmx:100816376 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02867 6 91978892 91983797 Arst5g03987 5 101201697 101206706 PCT