Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03953 ATGGATAATCATGCGAACGAACCTGCAAGTTTCTGGACTCAAGCAAACGCTCTCCTCCGGAAGAATTTAACATTCCAGAAGAGAAATGCGAAGACAAATGTGAGGCTAATCATGTTCCCATTCGTGCTGTGCCTGCTGCTGCTGCTTCTCCAGAAGCTGGTGGACAACCAGCTGGACAAGGACAAATACAAGTGTGGTTGCACCTGTACCAAGTCAGAAGATGGGCAGTGCCTTGAGAAAGTGTGTGGTGCTCAGTACTCAGATTTGGACCAAGTTGGTGCTTGTGCCGTTCCCAATCCTCCTGAGTGGCCTCCCGTGCAACAAGTGCCTGCCCCTAATTACAGAGCCGTCTCCGCTGACTTTATTTCCGAGTCCGATCTTCCAAACCGCTCCTGCAGGAGTAACGGCTCTTGTCCTATCACCATGCTCTTCACGGGAAAAAACCAATCATTTGGTCAAATTTTGTACAGGAATATGATCCCTAGTAACTTTACTATGAATACATCTAATGTGATGGCTAGTTTGGCCACAGATCTGCTGGGATCAGCATCAAAGACAGAAAACACCAATTTTCTTGAATCCGCTTTCTTTTCAGGCCTTCCTGTTTATTATCTACAAAAGCAATGCACAGAGAACTCTACATTTTCCTTTCCACTCCAGATAGAATCCTATAGTATACAGCAAGAGGTAACATGTGCTCAGGTTTTACCTTTGTGGCGTAATAGTCCTTCTGAAGTGAACAATGAACTATATAAAGGTTATCGAAAAGGGAACTCCGAGAGACAGATCAATGAGATAGCTGCAGGTTACGATTTTCTAAATTCCAATCACAATATATATAATGTCAGCATATGGTACAACTCAACCTACAAAAATGACACTGGCTTTGATCCTATTGCATTGGCAAGGGTTCCTCGTTCCGTAAATCTGGTATCAAATGCCTACCTTCAATTTTTGATGGGTCCTAATACCAAACTGTTGTTTGAGTTTGTGAAGGAAATGCCAAAACCTGAGACCAAAATCAAGTTTGATTTGGCTTCTCTTTTGGGTGGTCTCTTCTTTACATGGGTCGTCCTACAGCTTTTCCCTGTTGTTCTAACATCTCTAGTTTATGAGAAGCAACAAAAGTTAAGAATCATGATGAAAATGCATGGTCTTAGTGATGGACCATATTGGATGATTTCATATGGTTATTTTCTTGCACTATCTGTGATCTACATGCTGTGTTTTGTGCTATTTGGTTCAGGCATAGGGTTAAAATTCTTTACAAAGAATGACTACAGCATCCAATTCGTGTTTTACTTCATCTATATAAATTTACAAATTTCGCTGGCATTTCTATTGGCTTCCATGTTTTCAAATGTCAAGACTGCTACAGTAACTGCATACATAGGGGTATTTGGAACTGGGCTGTTAGGTGGTTTTCTTTTCCAGTTTTTTGTTCAGGATACATCATTCCCAAGAGGGTGGATCATTGTTTTGGAATTGTATCCTGGTTTTAGTTTATATCGTGGTCTGTATGAGTTTTCGCAATCTGCCTTCAGTGGGGATAAATTGGAAACTCATGGTATGCGCTGGGGAGATCTAAGCAATAGCACAAATGGCATGAAGGATGTCTTAATTATCATGTTTGTCGAATGGATATTCGTCCTTTTCTTTGCTTATTACATTGATCAAGTTTTTTTGTCTGGAAGTGCAAAAGGTCCCTTCTTTTTCTTGAAAAGGTTTCAGAAAAAGCCGCTCTCTTCTTTTCGGAAGCCTAGTTTGGGAAAGCAGGGATCTAAAGTTTTCATTCAGATGGATAAACCTGATGTTAGCCAAGAGAGGGAGAAGGTGGAGCAACTGCTACTTGAACCAACTATTAATCAAGCAATCGTATGTGACAACCTAAAAAAGGTCTATCCCGGGAGGGATGGTAATCCAGAGAAGTTTGCAGTAAGAGGCTTATCCCTTGCTTTGCCCAACGGGGAATGCTTCGGTATGCTTGGTCCCAATGGTGCTGGGAAGACCTCCTTTATCAATATGATGATCGGCCTCACAAAGCCAACCTCTGGTACAGCATTTGTTCAAGGTCTGGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTCTGTCCACAACATGACTTGCTGTGGGAAACCCTGACAGGAAGAGAACATCTACTCTTTTATGGAAGACTTAAGAATCTTAAGGGTTCAGCCTTAACACAAGCAGTGGAAGAATCATTGAAGAGTGTAAACCTTTTCCATGGAGGAGTTGCTGATAAACATGCTGGAAAATACAGTGGGGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGATCCTAGAGTTGTTTACATGGATGAGCCAAGTACTGGATTGGACCCAGCATCAAGAAACAACTTGTGGAATGTTGTTAGGCGCGCGAAACAGGATCGTGCTATCATCCTCACCACACATTCCATGGAAGAGGCAGAGGTCTTATGTGATCGGTTAGGAATATTTGTCGATGGTAGCTTGCAGTGCATAGGAAATCCAAAGGAGCTGAAAGCCAGATATGGGGGAACTTATGTGTTCACAATGACAACAACTATGGATCATGAGAAAGATGTGGAGAGCATGGTGCAACAACTCTACCCGGCTGCTAAGAAGGTTTACCACATCTCTGGCACCCAGAAGTTTGAGCTCCCCAAAGAAGAGGTCAGGATAGCTAGTGTGTTCCGAGCCGTCGAAACTGCAAAGCGAAACTTCACAGTCTCTGCATGGGGTTTAGCTGACACCACATTGGAAGATGTCTTCATCAAGGTTGCCCGTGACGCTCAGGCATTTGAGAAATTGTCTTAA 2844 0.4255 MDNHANEPASFWTQANALLRKNLTFQKRNAKTNVRLIMFPFVLCLLLLLLQKLVDNQLDKDKYKCGCTCTKSEDGQCLEKVCGAQYSDLDQVGACAVPNPPEWPPVQQVPAPNYRAVSADFISESDLPNRSCRSNGSCPITMLFTGKNQSFGQILYRNMIPSNFTMNTSNVMASLATDLLGSASKTENTNFLESAFFSGLPVYYLQKQCTENSTFSFPLQIESYSIQQEVTCAQVLPLWRNSPSEVNNELYKGYRKGNSERQINEIAAGYDFLNSNHNIYNVSIWYNSTYKNDTGFDPIALARVPRSVNLVSNAYLQFLMGPNTKLLFEFVKEMPKPETKIKFDLASLLGGLFFTWVVLQLFPVVLTSLVYEKQQKLRIMMKMHGLSDGPYWMISYGYFLALSVIYMLCFVLFGSGIGLKFFTKNDYSIQFVFYFIYINLQISLAFLLASMFSNVKTATVTAYIGVFGTGLLGGFLFQFFVQDTSFPRGWIIVLELYPGFSLYRGLYEFSQSAFSGDKLETHGMRWGDLSNSTNGMKDVLIIMFVEWIFVLFFAYYIDQVFLSGSAKGPFFFLKRFQKKPLSSFRKPSLGKQGSKVFIQMDKPDVSQEREKVEQLLLEPTINQAIVCDNLKKVYPGRDGNPEKFAVRGLSLALPNGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKHAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRNNLWNVVRRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKARYGGTYVFTMTTTMDHEKDVESMVQQLYPAAKKVYHISGTQKFELPKEEVRIASVFRAVETAKRNFTVSAWGLADTTLEDVFIKVARDAQAFEKLS 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03953 947 FunFam ABC transporter A family member 7 614 890 - -
Arst5g03953 947 Pfam ABC-2 family transporter protein 280 554 IPR013525 GO:0016020|GO:0140359
Arst5g03953 947 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 862 IPR003439 GO:0005524
Arst5g03953 947 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 586 942 IPR026082 GO:0016020|GO:0055085|GO:0140359
Arst5g03953 947 CDD ABC_subfamily_A 629 850 - -
Arst5g03953 947 SMART AAA_5 655 838 IPR003593 GO:0016887
Arst5g03953 947 Pfam ABC transporter 647 791 IPR003439 GO:0005524
Arst5g03953 947 ProSitePatterns ABC transporters family signature. 764 778 IPR017871 GO:0005524|GO:0016887
Arst5g03953 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 853 IPR027417 -
Arst5g03953 947 Gene3D - 617 891 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03953 Arst-Chr5 100644288 100653338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03953 602 849 Calmodulin-binding Proteins AT2G36910 22.780 3.71e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03953 - - gmx:100805474 1581.62