Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03952 ATGGAAGTGACGAGCGGTTTCGCGCTGCTCTTTCAGCAATTTAGCGCTCTCTTACGGAAGAACCTTCTGCTGTCATGGCGAAACAGGAAGGCAACGTTGCTTCAGGTTCTGTCACCACTCTTCTTCATGTTCCTCATCTTCGCCATTGACAAGGCAATTAAAGCTCAGTACTCGAACACAACTTACTACAAGAGCGTCCCTGAGCCTCCGCTTCGCCCTTCACCTTCCATCCCTCCATGCGAGAACAAGTTCTTCGTCAAACTCCCTTGCTATGATTTTGTATGGAGCGGTGATCGCAACCCTAGAATTCGGACCATTGTTGAAGCTATCATGAACAATAACCCTGGAAGGACTATACCTCCCTCTAAGGTGAAATCCTTTAGTGATAAAGCTGCAGTGGACGAGTGGCTTTTGAACAACCCTATGCACTGTCCAGGGGCTTTGCATTTTGTGGAAAGAAGTAAAACTATCATCAGCTATGGTTTACAGACAAATTCCACATATGTTCAAAAGAGAGGAAAATATGAAGACCCCACTTTTGCATTTCAACTCCCACTTCAGCTTGCTGCAGAGCGAGAAATTGCTAGGAACCTGATTGGAGACTCGAACTTCAGCTGGAATGTCTTTTTGAGGGAGTTTGCACACCCAGCCACGGCACCTTTCTCAACAGTGAGTTCCGTAGGTCCAACATTTTTCCTTGCGATTGCCATGTTCAATTTTGTGCTTCAGATGAGTTCTTTGGTTACAGAAAAAGAGCTTAAACTTCGCCAGGCAATGACTATGATGGGGCTTTATGATTCTGCTTACTGGTTGTCATGGCTCATCTGGGAGGCATTCATTACTCTCCTGTCATCCCTTCTCGTAGTTCTGTTTGGAATGATGTTTCAGTTTCGTTTCTTCTTGAAAAACGATTTTCTGGTCGTGTTCTTTGTGTTCTTCCTATTTGAACTCAGTATGACTGGCTTAGCTTTCATGCTATCTGCTTTCATTAGTAAATCCTCTTCAGCGACAACAGTAGGCTTCTCCATATTTATTGTTGGCTTTGTGACTCAGCTTGTTATACAAGCAGGATTTCCTTATTCAGATAGCATTTCCAAGACTTTCCGAATAATTTGGTCTTTCTTTCCGCCCAATCCCTTCGCTCAAGCTCTACATATTCTTTCTGAGGCGGTCTCAACTTCTGAAGATCATGGTATTCGATGGAGTAAACGGGGACAATGCGGTCCTGAAGATGAAGGCTGTGTGATTACAATTAATGACATTTATCAATGGCTCTTAGCTACATTCGTTTTGTGGTTTGTTCTGGCCATCTACTTCGACAACATAATCCCCAATGCATCTGGTGTGAGGAAATCGATGTTATACTTTCTAAATCCGAACTATTGGATGGGAAGAGGAGGCCAAAATGTGAAAGAGGGTGGGGTTTGTAGTTGCTGCATAGTTTCAGTGCCTCGTCAAGAACATGTTACACCAGATGATCAAGATGTCCTTGAAGAACAAAATACTGTCAAAAGACAAATAACAGAAGGTGTGGTTGATGCAAATGTTGCTGTTCAGATACGTGGCCTTGCAAAGACATATCCTGGTTCTTGTAATATTGGTTGCTGCTGTAAATGTAAAAGAACTAAACCTTACAATGCCGTTAAGGATTTATGGGTGAACTTTGAAAGGGATCAACTATTTTGTCTATTAGGACCTAATGGAGCGGGTAAAACTACGGTTATTAATTGTTTGACAGGGATAACTCCAGCAACTGATGGAGATGCATTGATTTATGGACATTCCATCCGTAGCTCCACTGGCATGTCAAACATTCAAAAGCTTATAGGAGTATGTCCCCAGTTTGATATCTTGTGGGATGCACTGTCCGGCGAAGAGCATCTTCAACTCTTTGCTACTATCAAAGGCCTAACCCCAAGTTCCATCAACTCAATTACCCAAACATCACTGGCAGAGGTGAGACTCACTGATTCGGCAAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAACGTCGACTCAGTGTTGCAATTTCCCTTATTGGTGACCCTAAATTGGTTGTTTTGGATGAACCAACTACTGGTATGGATCCAATAACAAGGAGGCACGTATGGGACATAATTGAAAATGCTAAAAGAGGTCGTGCCATTGTCCTTACCACACACTCTATGGAAGAAGCTGACATTCTCAGTGATCGAATAGGAATCATGGCAAAGGGAAAGCTTCGCTGTATTGGCACCGCAATCAGATTGAAGTCACGCTTTGGTACTGGTTTCATTGCTAATATCAGCTTCTATGGGAACAATGTTGAAAGTCGTACAGACAATAGGGATGCTGTTTCTACGGTACATCATGAGGCTGTGAAGCAATTCTTTAAGAATCATTTAGATGTAGTGCCAAAGGAAGAGAACAACAACTTCATAACTTTTGTGATTCCTCATGACAAAGAGGGGCTCCTGACAAATTTTTTTGCGGAGCTCCAAGATAGAGAAGAAGAATTTGGCATATCTGACATTCAGCTTGGTCTGACAACTCTAGAAGAAGTTTTCCTGAATATTGCAAAGCAAGCAGAGCTAGAAAGCGCTGCAGCTGATGGGACCCTAGTGACTTTGACCTTAACATCTGGGGAGTCTGTGCAGATTCCTATAGGAGCTAGATTTGTTGGAATTCCAGAAACAGAGTCTGAAGAGTACCCAACAGGGGTTATGGTAGAAGTATACTGGGAGCAAGATGAATCTGGTGCTCTATGTATCTCTGGTCACTCACAAAAAGTTCCAGTTCCTTCTGGTGTTCGACTATCATCATCTGCTTCGGCAAGACACCGTAGAAATTCGCGCCGACCAGGATCAGTTCACGGGGTTATAATTGATCCCAGCCAAGTTAGTTCAGTCAGGTTTCAATGA 2904 0.4311 MEVTSGFALLFQQFSALLRKNLLLSWRNRKATLLQVLSPLFFMFLIFAIDKAIKAQYSNTTYYKSVPEPPLRPSPSIPPCENKFFVKLPCYDFVWSGDRNPRIRTIVEAIMNNNPGRTIPPSKVKSFSDKAAVDEWLLNNPMHCPGALHFVERSKTIISYGLQTNSTYVQKRGKYEDPTFAFQLPLQLAAEREIARNLIGDSNFSWNVFLREFAHPATAPFSTVSSVGPTFFLAIAMFNFVLQMSSLVTEKELKLRQAMTMMGLYDSAYWLSWLIWEAFITLLSSLLVVLFGMMFQFRFFLKNDFLVVFFVFFLFELSMTGLAFMLSAFISKSSSATTVGFSIFIVGFVTQLVIQAGFPYSDSISKTFRIIWSFFPPNPFAQALHILSEAVSTSEDHGIRWSKRGQCGPEDEGCVITINDIYQWLLATFVLWFVLAIYFDNIIPNASGVRKSMLYFLNPNYWMGRGGQNVKEGGVCSCCIVSVPRQEHVTPDDQDVLEEQNTVKRQITEGVVDANVAVQIRGLAKTYPGSCNIGCCCKCKRTKPYNAVKDLWVNFERDQLFCLLGPNGAGKTTVINCLTGITPATDGDALIYGHSIRSSTGMSNIQKLIGVCPQFDILWDALSGEEHLQLFATIKGLTPSSINSITQTSLAEVRLTDSAKVRAGSYSGGMKRRLSVAISLIGDPKLVVLDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGKLRCIGTAIRLKSRFGTGFIANISFYGNNVESRTDNRDAVSTVHHEAVKQFFKNHLDVVPKEENNNFITFVIPHDKEGLLTNFFAELQDREEEFGISDIQLGLTTLEEVFLNIAKQAELESAAADGTLVTLTLTSGESVQIPIGARFVGIPETESEEYPTGVMVEVYWEQDESGALCISGHSQKVPVPSGVRLSSSASARHRRNSRRPGSVHGVIIDPSQVSSVRFQ 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03952 967 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 484 860 IPR026082 GO:0016020|GO:0055085|GO:0140359
Arst5g03952 967 FunFam ABC transporter A family member 2 508 772 - -
Arst5g03952 967 ProSitePatterns ABC transporters family signature. 666 680 IPR017871 GO:0005524|GO:0016887
Arst5g03952 967 Gene3D - 507 786 IPR027417 -
Arst5g03952 967 MobiDBLite consensus disorder prediction 928 954 - -
Arst5g03952 967 Pfam ABC-2 family transporter protein 30 438 IPR013525 GO:0016020|GO:0140359
Arst5g03952 967 SMART AAA_5 557 741 IPR003593 GO:0016887
Arst5g03952 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 746 IPR027417 -
Arst5g03952 967 CDD ABC_subfamily_A 518 752 - -
Arst5g03952 967 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 518 764 IPR003439 GO:0005524
Arst5g03952 967 Pfam ABC transporter 549 693 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03952 Arst-Chr5 100619074 100625301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03952 496 763 Calmodulin-binding Proteins AT2G36910 20.000 1.71e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03952 - - gmx:100786538 1556.96