Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03947 ATGGAAAGGGCTCTGGTAGCTTGGGTGATTTTGGTGATTTCCACCATTGTTTACTTCCATTCCTCTCTTGCTCTCTCACAAGATGGTGTCACATTGTTGGAAATCAAAAGCAGTTTGAATGACACAAGGAATTTTCTCAGTAACTGGCAACATTCTAATATCAAGTCCTATTGTAGATGGACTGGTATCACCTGTTATCCCGAGAAAGAACAGCGAGTTCGCTCGATAAATCTGCCTTACATGCAACTTGGTGGAATCATATCTCCCAGCATAGGCAAACTCAGTCGATTGCGGAGATTGGCACTTCATCAGAATGGTTTACATGATATTATTCCTAATGAGATTACCAATTGTACTGAGCTAAGAGCATTGTACTTGAGAGCCAATTATTTTCAAGGAGGAATCCCGCCAGATATTGGAAACCTATTGCATTTAAAAATATTGGATTTATCAAGCAACTCATTAAAGGGTGCAATACCTTCTTCTATTGGACAGCTCACACATTTGCAACTTTTGAACTTGTCGACGAATTTCTTTTCTGGTGAAATCCCTGACGAGGGAGTACTAGGAGCCTTTGGGAAAAACGTGTTTATTGGCAATTTAGATCTTTGTGGACGGCAAGTTAAAAAACCATGTCACACAACACTTGGTTTCCCTGTGGTGCTACCACATGCTGAGAATGATGAATCGGAAGTAACTACCAAAAGAATATCACATTATGTGAAGTGGGTGTTAATCGGTGCAATATCAACAATGGGCATTGCACTTGCCTTAGTACTTCTGTTACTCTGGATTTGTTTGCCGTCGAAGAAGGAAAGAACTGCTAGGCAATACACAGAAGTGAACAAACAAGTCAATCCAGAATCAAGTACAAAGGGTGGTACAATACTAATTACTTTCCATGGTGATCTGCCATATCCATCATCTGAGATCATAGAGAAACTGGAGTCACTTGATGAAGAGGATGTGGTAGGGTCTGGGGGATTTGGTACTGTTTACCGCATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGCGGCTTGATAGAGGTCGGGAAGGGTCAGATCAAGGATTTGAAAGGGAACTAGAAATCTTAGGTAGTATCAAGCACATCAATTTGGTAAACCTTCGTGGTTATTGCAGGCTTCCTTCTACAAAGCTCCTTATCTATGATTATTTGGCACTGGGAAGCTTGGATTGTCTCTTGCATGGAAACAGTGAGCATTTTATGAATTGGCACACTCGCCTAAAGATAGCCCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCATCATGACTGCTCCCCCAAAATCGTGCATCGAGACGTTAAATCTAGCAACATCCTTCTTGATGAAAACATGGAGCCTCATGTCTCTGATTTTGGACTTGCAAAGCTTTTGGTTGATGATGACTCCCATGTTACTACAGTTGTTGCTGGCACATTCGGCTATTTGGCGCCAGATGAACACAGTCCAAAAAGAAAACAGATTCAAAGAAGTGTTAGACAAAAGATGCACCGATGCAGATTGGGAGTCTGTCGAAGTGATCATTGA 1554 0.417 MERALVAWVILVISTIVYFHSSLALSQDGVTLLEIKSSLNDTRNFLSNWQHSNIKSYCRWTGITCYPEKEQRVRSINLPYMQLGGIISPSIGKLSRLRRLALHQNGLHDIIPNEITNCTELRALYLRANYFQGGIPPDIGNLLHLKILDLSSNSLKGAIPSSIGQLTHLQLLNLSTNFFSGEIPDEGVLGAFGKNVFIGNLDLCGRQVKKPCHTTLGFPVVLPHAENDESEVTTKRISHYVKWVLIGAISTMGIALALVLLLLWICLPSKKERTARQYTEVNKQVNPESSTKGGTILITFHGDLPYPSSEIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRLDRGREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLALGSLDCLLHGNSEHFMNWHTRLKIALGSARGLAYLHHDCSPKIVHRDVKSSNILLDENMEPHVSDFGLAKLLVDDDSHVTTVVAGTFGYLAPDEHSPKRKQIQRSVRQKMHRCRLGVCRSDH 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03947 517 Pfam Leucine Rich Repeat 144 164 IPR001611 GO:0005515
Arst5g03947 517 Gene3D Transferase(Phosphotransferase) domain 1 394 501 - -
Arst5g03947 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Arst5g03947 517 FunFam Protein kinase superfamily protein 394 466 - -
Arst5g03947 517 Gene3D Phosphorylase Kinase; domain 1 280 393 - -
Arst5g03947 517 Pfam Protein kinase domain 320 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03947 517 PANTHER RECEPTOR-LIKE PROTEIN 55 35 160 - -
Arst5g03947 517 SUPERFAMILY Protein kinase-like (PK-like) 296 492 IPR011009 -
Arst5g03947 517 SUPERFAMILY L domain-like 26 198 - -
Arst5g03947 517 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Arst5g03947 517 ProSiteProfiles Protein kinase domain profile. 318 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03947 517 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Arst5g03947 517 SMART serkin_6 318 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03947 517 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 189 - -
Arst5g03947 517 Gene3D Ribonuclease Inhibitor 25 214 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03947 Arst-Chr5 100521875 100528620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03947 1 501 Receptor kinase-like Gene Family AT2G35620 45.709 5.17e-137 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Arst5g03947 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03947 - - gmx:100783363 778.859