Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03946 ATGGAAAGGGCTCTGGTAGCTTGGGTGATTTTGGTGATTTCCACCATTGTTTACTTCCATTCCTCTCTTGCTCTCTCACAAGATGGTGTCACATTGTTGGAAATCAAAAGCAGTTTGAATGACACAAGGAATTTTCTCAGTAACTGGCAACATTCTAATATCAAGTCCTATTGTAGATGGACTGGTATCACCTGTTATCCCGAGAAAGAACAGCGAGTTCGCTCGATAAATCTGCCTTACATGCAACTTGGTGGAATCATATCTCCCAGCATAGGCAAACTCAGTCGATTGCGGAGATTGGCACTTCATCAGAATGGTTTACATGATATTATTCCTAATGAGATTACCAATTGTACTGAGCTAAGAGCATTGTACTTGAGAGCCAATTATTTTCAAGGAGGAATCCCGCCAGATATTGGAAACCTATTGCATTTAAAAATATTGGATTTATCAAGCAACTCATTAAAGGGTGCAATACCTTCTTCTATTGGACAGCTCACACATTTGCAACTTTTGAACTTGTCGACGAATTTCTTTTCTGGTGAAATCCCTGACGAGGGAGTACTAGGAGCCTTTGGGAAAAACGTGTTTATTGGCAATTTAGATCTTTGTGGACGGCAAGTTAAAAAACCATGTCACACAACACTTGGTTTCCCTGTGGTGCTACCACATGCTGAGAATGATGAATCGGAAGTAACTACCAAAAGAATATCACATTATGTGAAGTGGGTGTTAATCGGTGCAATATCAACAATGGGCATTGCACTTGCCTTAGTACTTCTGTTACTCTGGATTTGTTTGCCGTCGAAGAAGGAAAGAACTGCTAGGCAATACACAGAAGTGAACAAACAAGTCAATCCAGAATCAAGTACAATACTAATTACTTTCCATGGTGATCTGCCATATCCATCATCTGAGATCATAGAGAAACTGGAGTCACTTGATGAAGAGGATGTGGTAGGGTCTGGGGGATTTGGTACTGTTTACCGCATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGCGGCTTGATAGAGGTCGGGAAGGGTCAGATCAAGGATTTGAAAGGGAACTAGAAATCTTAGGTAGTATCAAGCACATCAATTTGGTAAACCTTCGTGGTTATTGCAGGCTTCCTTCTACAAAGCTCCTTATCTATGATTATTTGGCACTGGGAAGCTTGGATTGTCTCTTGCATGGAAACAGTGAGCATTTTATGAATTGGCACACTCGCCTAAAGATAGCCCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCATCATGACTGCTCCCCCAAAATCGTGCATCGAGACGTTAAATCTAGCAACATCCTTCTTGATGAAAACATGGAGCCTCATGTCTCTGATTTTGGACTTGCAAAGCTTTTGGTTGATGATGACTCCCATGTTACTACAGTTGTTGCTGGCACATTCGGCTATTTGGCGCCAGAATATCTACAAAGTGGGAGAGCAACTGAGAAGTCAGATGTATATAGCTTTGGAGTTCTATTGCTAGAACTGGTAACTGGAAAGAGACCAACAGATCCTTCCTTCCTGAAGAGAGGGCAAAATGTTGTTGGTTGGATGAACACAGTCCAAAAAGAAAACAGATTCAAAGAAGTGTTAGACAAAAGATGCACCGATGCAGATTGGGAGTCTGTCGAAGTGATCATTGAACTGGCAGCAAGATGCACGGATGCAAATGCAGACGACCGTCCTATGATGAACGAAGTGGTACAGTTGCTGGAGCAAGAGGTTATGTCTCCTTGTTCAAGTGGTTTATATGAGTCACAAATAAATCATTATTGA 1809 0.4174 MERALVAWVILVISTIVYFHSSLALSQDGVTLLEIKSSLNDTRNFLSNWQHSNIKSYCRWTGITCYPEKEQRVRSINLPYMQLGGIISPSIGKLSRLRRLALHQNGLHDIIPNEITNCTELRALYLRANYFQGGIPPDIGNLLHLKILDLSSNSLKGAIPSSIGQLTHLQLLNLSTNFFSGEIPDEGVLGAFGKNVFIGNLDLCGRQVKKPCHTTLGFPVVLPHAENDESEVTTKRISHYVKWVLIGAISTMGIALALVLLLLWICLPSKKERTARQYTEVNKQVNPESSTILITFHGDLPYPSSEIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRLDRGREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLALGSLDCLLHGNSEHFMNWHTRLKIALGSARGLAYLHHDCSPKIVHRDVKSSNILLDENMEPHVSDFGLAKLLVDDDSHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFLKRGQNVVGWMNTVQKENRFKEVLDKRCTDADWESVEVIIELAARCTDANADDRPMMNEVVQLLEQEVMSPCSSGLYESQINHY 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03946 602 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 189 - -
Arst5g03946 602 Gene3D Phosphorylase Kinase; domain 1 274 389 - -
Arst5g03946 602 SMART serkin_6 314 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03946 602 Pfam Leucine Rich Repeat 144 164 IPR001611 GO:0005515
Arst5g03946 602 Pfam Protein kinase domain 316 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03946 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Arst5g03946 602 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Arst5g03946 602 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Arst5g03946 602 Gene3D Transferase(Phosphotransferase) domain 1 391 591 - -
Arst5g03946 602 SUPERFAMILY Protein kinase-like (PK-like) 292 583 IPR011009 -
Arst5g03946 602 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 390 594 - -
Arst5g03946 602 SUPERFAMILY L domain-like 26 198 - -
Arst5g03946 602 Gene3D Ribonuclease Inhibitor 25 214 IPR032675 -
Arst5g03946 602 ProSiteProfiles Protein kinase domain profile. 314 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03946 602 PANTHER LEUCINE RICH REPEAT KINASE 2 54 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03946 Arst-Chr5 100521875 100528739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03946 1 590 Receptor kinase-like Gene Family AT2G35620 48.136 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Arst5g03946 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03946 - - gmx:100783363 971.844