Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03943 ATGACACAAGGAATTTTCTCAGTAACTGGCAACATTCTAATATCAAGTCCTATTGTAGATGGACTGGTATCACCTGTTATCCCGAGAAAGAACAGCGAGTTCGCTCGATGTATAAATCTGCCTTACATGCAACTTGGTGGAATCATATCTCCCAGCATAGGCAAACTCAGTCGATTGCGGAGATTGGCACTTCATCAGAATGGTTTACATGATATTATTCCTAATGAGATTACCAATTGTACTGAGCTAAGAGCATTGTACTTGAGAGCCAATTATTTTCAAGGAGGAATCCCGCCAGATATTGGAAACCTATTGCATTTAAAAATATTGGATTTATCAAGCAACTCATTAAAGGGTGCAATACCTTCTTCTATTGGACAGCTCACACATTTGCAACTTTTGAACTTGTCGACGAATTTCTTTTCTGGTGAAATCCCTGACGAGGGAGTACTAGGAGCCTTTGGGAAAAACGTGTTTATTGGCAATTTAGATCTTTGTGGACGGCAAGTTAAAAAACCATGTCACACAACACTTGGTTTCCCTGTGGTGCTACCACATGCTGAGAATGATGAATCGGAAGTAACTACCAAAAGAATATCACATTATGTGAAGTGGGTGTTAATCGGTGCAATATCAACAATGGGCATTGCACTTGCCTTAGTACTTCTGTTACTCTGGATTTGTTTGCCGTCGAAGAAGGAAAGAACTGCTAGGCAATACACAGAAGTGAACAAACAAGTCAATCCAGAATCAAGTACAAAGGGTGGTACAATACTAATTACTTTCCATGGTGATCTGCCATATCCATCATCTGAGATCATAGAGAAACTGGAGTCACTTGATGAAGAGGATGTGGTAGGGTCTGGGGGATTTGGTACTGTTTACCGCATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGCGGCTTGATAGAGGTCGGGAAGGGTCAGATCAAGGATTTGAAAGGGAACTAGAAATCTTAGGTAGTATCAAGCACATCAATTTGGTAAACCTTCGTGGTTATTGCAGGCTTCCTTCTACAAAGCTCCTTATCTATGATTATTTGGCACTGGGAAGCTTGGATTGTCTCTTGCATGGAAACAGTGAGCATTTTATGAATTGGCACACTCGCCTAAAGATAGCCCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCATCATGACTGCTCCCCCAAAATCGTGCATCGAGACGTTAAATCTAGCAACATCCTTCTTGATGAAAACATGGAGCCTCATGTCTCTGATTTTGGACTTGCAAAGCTTTTGGTTGATGATGACTCCCATGTTACTACAGTTGTTGCTGGCACATTCGGCTATTTGGCGCCAGAATATCTACAAAGTGGGAGAGCAACTGAGAAGTCAGATGTATATAGCTTTGGAGTTCTATTGCTAGAACTGGTAACTGGAAAGAGACCAACAGATCCTTCCTTCCTGAAGAGAGGGCAAAATGTTGTTGGTTGGATGAACACAGTCCAAAAAGAAAACAGATTCAAAGAAGTGTTAGACAAAAGATGCACCGATGCAGATTGGGAGTCTGTCGAAGTGATCATTGAACTGGCAGCAAGATGCACGGATGCAAATGCAGACGACCGTCCTATGATGAACGAAGTGGTACAGTTGCTGGAGCAAGAGGTTATGTCTCCTTGTTCAAGTGGTTTATATGAGTCACAAATAAATCATTATTGA 1707 0.4171 MTQGIFSVTGNILISSPIVDGLVSPVIPRKNSEFARCINLPYMQLGGIISPSIGKLSRLRRLALHQNGLHDIIPNEITNCTELRALYLRANYFQGGIPPDIGNLLHLKILDLSSNSLKGAIPSSIGQLTHLQLLNLSTNFFSGEIPDEGVLGAFGKNVFIGNLDLCGRQVKKPCHTTLGFPVVLPHAENDESEVTTKRISHYVKWVLIGAISTMGIALALVLLLLWICLPSKKERTARQYTEVNKQVNPESSTKGGTILITFHGDLPYPSSEIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRLDRGREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLALGSLDCLLHGNSEHFMNWHTRLKIALGSARGLAYLHHDCSPKIVHRDVKSSNILLDENMEPHVSDFGLAKLLVDDDSHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFLKRGQNVVGWMNTVQKENRFKEVLDKRCTDADWESVEVIIELAARCTDANADDRPMMNEVVQLLEQEVMSPCSSGLYESQINHY 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03943 568 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 50 174 - -
Arst5g03943 568 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 356 560 - -
Arst5g03943 568 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 39 549 - -
Arst5g03943 568 ProSiteProfiles Protein kinase domain profile. 280 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03943 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Arst5g03943 568 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
Arst5g03943 568 Pfam Protein kinase domain 282 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03943 568 Gene3D Transferase(Phosphotransferase) domain 1 357 557 - -
Arst5g03943 568 SUPERFAMILY Protein kinase-like (PK-like) 258 549 IPR011009 -
Arst5g03943 568 SUPERFAMILY L domain-like 37 148 - -
Arst5g03943 568 SMART serkin_6 280 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g03943 568 Gene3D Ribonuclease Inhibitor 27 176 IPR032675 -
Arst5g03943 568 Gene3D Phosphorylase Kinase; domain 1 242 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03943 Arst-Chr5 100521875 100528739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03943 38 556 Receptor kinase-like Gene Family AT2G35620 51.445 2.08e-178 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Arst5g03943 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03943 - - gmx:100783363 885.56